SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MNC17.P2 (Universal genetic code) : 172 aa
 vs  library
 searching gnl:PID:e327430 library

    439 residues in     1 sequences
The best scores are:                              s-w
gnl|PID|e327430                                    (439) 574

>>gnl|PID|e327430                                    (439 aa)
Smith-Waterman score: 574;   55.758% identity in 165 aa overlap

gnl|PI MTKGIVTTVAVGNAGTALAKADNLAPWLISVAAGSTDRKFVTNVVNGDDKMLPGRSINDF
               10        20        30        40        50        60

gnl|PI DLEGKKYPLAYGKTASNNCTEELARGCASGCLNTVEGKIVVCDVPNNVMEQKAAGAVGTI
               70        80        90       100       110       120

gnl|PI LHVTDVDTPGLGPIAVATLDDTNYEELRSYVLSSPNPQGTILKTNTVKDNGAPVVPAFSS
              130       140       150       160       170       180

gnl|PI RGPNTLFSDILSNEHSKRNNRPMSQYISSIFTTGSNRVPGQSVDYYFMTGTSMACPHVAG
              190       200       210       220       230       240

                                                10        20       
MNC17.                                  MGKRATYGAGHVDPIAATNPGLVYEMD
                                              ::.: :.: .:..::::::. 
gnl|PI VAAYVKTLRPDWSASAIKSAIMTTAWAMNASKNAEAEFAYGSGFVNPTVAVDPGLVYEIA
              250       260       270       280       290       300

        30        40        50        60         70        80      
MNC17. KADHIAFLCGLNYTADTLALIAGETITCTKENK-TLPRNLNYPSMSAQLRRSESSLTVTF
       : :.. .::.:.:... .. ::: :.::....: :. ::::::::::..  : ::  .::
gnl|PI KEDYLNMLCSLDYSSQGISTIAGGTFTCSEQSKLTM-RNLNYPSMSAKVSASSSS-DITF
              310       320       330        340       350         

         90       100       110        120       130       140     
MNC17. NRTVTNVGTPNSTYKSKVVLNQGS-KLNVKVTPSVLSFKTVSEKKSFTVTVTGSDSDPKL
       .:::::::  .::::.:  :. :. ::..:: :..::::. .:::::::::.:. :   .
gnl|PI SRTVTNVGEKGSTYKAK--LS-GNPKLSIKVEPATLSFKAPGEKKSFTVTVSGK-SLAGI
      360       370          380       390       400        410    

           150       160       170  
MNC17. PS--SANLIWSDGTHNVRSPIVIYIDGAY
        .  ::.::::::.::::::::.:     
gnl|PI SNIVSASLIWSDGSHNVRSPIVVYT    
          420       430             

Library scan:  0:00:00  total CPU time:  0:00:00