SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MNC17.15 (Universal genetic code) : 342 aa
 vs  library
 searching gi:2351580 library

    265 residues in     1 sequences
The best scores are:                              s-w
gi|2351580                                         (265)1650

>>gi|2351580                                         (265 aa)
Smith-Waterman score: 1650;   91.288% identity in 264 aa overlap

               10        20        30        40        50        60
MNC17. MAATSEKQNTTKPPPSPSPLRNSKFCQPNMRILISGGAGFIGSHLVDKLMENEKNEVVVA

               70        80        90       100       110       120
MNC17. DNYFTGSKENLKKWIGHPRFELIRHDVTEPLLIEVDRIYHLACPASPIFYKYNPVKTIKT
                         ::::::::::::::::::.:::::::::::::::::::::::
gi|235                   RFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKT
                                 10        20        30        40  

              130       140       150       160       170       180
MNC17. NVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVA
       :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::::
gi|235 NVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQTESYWGNVNPIGVRSCYDEGKRVA
             50        60        70        80        90       100  

              190       200       210       220       230       240
MNC17. ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQALRGEALTVQKPGTQTRS
       :::::::::::::::::::::::::::::::::::::::::::.: . :::: :::::::
gi|235 ETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRDDPLTVQAPGTQTRS
            110       120       130       140       150       160  

              250       260       270       280       290       300
MNC17. FCYVSDMVDGLIRLMEGNDTGPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDP
       :::::::::::::::.:..::::::::::::::.::::.:::::::..:: :::::::::
gi|235 FCYVSDMVDGLIRLMQGDNTGPINIGNPGEFTMIELAENVKELINPKVEIIMVENTPDDP
            170       180       190       200       210       220  

              310       320       330       340   
MNC17. RQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRLNVPRN 
       :::::::.:::..::::::::::.::::::.::: ::.::.: 
gi|235 RQRKPDITKAKDLLGWEPKVKLRDGLPLMEDDFRTRLGVPKNK
            230       240       250       260     

Library scan:  0:00:00  total CPU time:  0:00:00