SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MNC17.12 (Universal genetic code) : 541 aa
 vs  library
 searching gi:2895856 library

    457 residues in     1 sequences
The best scores are:                              s-w
gi|2895856                                         (457) 963

>>gi|2895856                                         (457 aa)
Smith-Waterman score: 963;   37.013% identity in 462 aa overlap

               10        20        30        40        50        60
MNC17. MAFAVSVQSHFAIRALKRDHFKNPSPRTFCSCFKSRPDSSYLSLKERTCFVSKPGLVTTR

               70        80        90       100       110       120
MNC17. YRHIFQVGAETGGEFADSGEVADSLASDAPESFSWSSVILPFIFPALGGLLFGYDIGATS
                                                ..: :::::::::: :. :
gi|289                                 MRKVSTGFVYFFGALGGLLFGYDTGVIS
                                               10        20        

                           130       140        150       160      
MNC17. GATLSLQ-------------VSGSLYGALLGSISVYG-VADFLGRRRELIIAAVLYLLGS
       :: : .:             ::. : ::.::. .. :  .: .:::. :...:.....:.
gi|289 GAILFIQKQMNLGSWQQGWVVSAVLLGAILGA-AIIGPSSDRFGRRKLLLLSAIIFFVGA
       30        40        50        60         70        80       

        170       180       190       200       210       220      
MNC17. LITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILL
       : .. .:..  :...:.. :...: :    : :.::  ::. :::. :: .:... ::::
gi|289 LGSAFSPEFWTLIISRIILGMAVGAASALIPTYLAELAPSDKRGTVSSLFQLMVMTGILL
        90       100       110       120       130       140       

        230        240        250        260       270       280   
MNC17. GFSVG-SFQIDVVGGWRYMYGFGT-PVALL-MGLGMWSLPASPRWLLLRAVQGKGQLQEY
       .. .. ::.     :::.: ::.. :.::: .: :.  :: :::.:    :.. :.:.: 
gi|289 AYITNYSFS-GFYTGWRWMLGFAAIPAALLFLG-GLI-LPESPRFL----VKS-GHLDEA
       150        160       170        180        190              

           290       300        310       320       330        340 
MNC17. KEKAMLALSKLRGRPPGDKIS-EKLVDDAYLSVKTAYEDEKSGGNFLEVFQGPNLK-ALT
       .. .. ...:       :... .: ..:   :.: .     ::: . :.: :  .. .: 
gi|289 RH-VLDTMNK------HDQVAVNKEINDIQESAKIV-----SGG-WSELF-GKMVRPSLI
     200              210       220            230         240     

             350       360       370       380       390       400 
MNC17. IGGGLVLFQQITGQPSVLYYAGSILQTAGFSAAADATRVSVIIGVFKLLMTWVAVAKVDD
       :: ::..:::. :  .::::: .:.  .::...: :  . . ::.:....: .::: .: 
gi|289 IGIGLAIFQQVMGCNTVLYYAPTIFTDVGFGVSA-ALLAHIGIGIFNVIVTAIAVAIMDK
         250       260       270        280       290       300    

              410       420       430          440       450       
MNC17. LGRRPLL-IGGVSGIALSLFLLSAYYKFLGGFP---LVAVGALLLYVGCYQREQISFGPI
       . :. .. ::.: :...:::..:  .:: ::     ...: :: .:.. .   . ..::.
gi|289 IDRKKIVNIGAV-GMGISLFVMSIGMKFSGGSQTAAIISVIALTVYIAFF---SATWGPV
          310        320       330       340       350          360

       460       470       480       490        500       510      
MNC17. SWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSP-LKEFLGAENLFLLFGGIALVS
        :.:..:.:::  :: : :.: . :. .: ::...: : : .:.:. .::. .: . ..:
gi|289 MWVMIGEVFPLNIRGLGNSFASVINWTANMIVSLTF-PSLLDFFGTGSLFIGYGILCFAS
              370       380       390        400       410         

        520       530       540              
MNC17. LLFVILVVPETKGLSLEEIESKILK             
       . ::   : ::.. :::.::. .               
gi|289 IWFVQKKVFETRNRSLEDIEATLRAKTGEDAAELSTTK
     420       430       440       450       

Library scan:  0:00:00  total CPU time:  0:00:00