Gene organization of MNC17 (75803 bp)
Chromosome V 22-24 Mb   FTP   Reference   Kazusa Status  
Gene organization of MNC17
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MNC17.1
-
4172..7067 9 3 cucumisin (EC 3.4.21.25) precursor
MNC17.2
-
9467..12763 9 0 cucumisin (EC 3.4.21.25) precursor
MNC17.3
-
14382..14903 2 0 Elongin C
MNC17.4
+
16130..17513 3 5 Rab11 protein
MNC17.5
+
18863..20371 3 5 serine/threonine protein phosphatase pp1 isozyme 2
MNC17.6
+
21317..22180 1 2 cell wall protein
MNC17.7
+
22771..24245 6 0 DNA-directed RNA polymerase II 19 kD polypeptide (RNA polymerase II subunit 5)
MNC17.8
+
24925..27942 9 0 cucumisin (EC 3.4.21.25) precursor
MNC17.9
-
28068..29837 1 0 hypothetical protein
MNC17.10
-
33947..35769 4 1 phosphoprotein phosphatase (EC 3.1.3.16) 2C
MNC17.11
-
42080..42942 3 0 40s ribosomal protein S8
MNC17.12
+
43230..46122 13 2 D-xylose proton-symporter
MNC17.13
-
47176..49197 1 0 receptor-like protein kinase
MNC17.14
-
50426..52507 2 0 receptor like protein kinase
MNC17.15
-
55089..57225 11 3 thymidine diphospho-glucose 4-6-dehydratase homolog
MNC17.16
-
59143..60465 6 2 ubiquitin conjugating enzyme E2 protein
MNC17.17
-
64715..65044 1 23 similar to phospholipid transfer protein (E2 gene product)
MNC17.18
+
68323..68661 1 16 similar to phospholipid transfer protein (E2 gene product)


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MNC17.P1
-
1..1359 5 0 cucumisin
MNC17.P2
-
2805..3320 1 0 cucumisin
MNC17.P3
+
70879..71004 1 0 Cw-19 peptide, non specific lipid transfer protein, precursor
MNC17.P4
-
73696..73830 1 0 putative serine protease


transcribed regions

identifier direction position Definition of the most similar sequence

MNC17.T1
-
31176..31493 Lambda-PRL2 cDNA clone 182D10T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones (1998) Erika Asamizu, Shusei Sato, Takakazu Kaneko, Yasukazu Nakamura, Hirokazu Kotani, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 379-391
o Kazusa Status