SSEARCH searches a sequence database using the Smith-Waterman algorithm version 2.0u54, July. 1996 Please cite: T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; W.R. Pearson (1991) Genomics 11:635-650 >MNA5.10 (Universal genetic code) : 245 aa vs library searching 143k_arath library 248 residues in 1 sequences The best scores are: s-w 143K_ARATH, 248 bases, 110C checksum. (248)1478 >>143K_ARATH, 248 bases, 110C checksum. (248 aa) Smith-Waterman score: 1478; 97.143% identity in 245 aa overlap 10 20 30 40 50 60 MNA5.1 MATTLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSVAYKNVIG :::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::: 143K_A MATTLSRDQYVYMAKLAEQAERYEEMVQFMEQLVSGATPAGELTVEERNLLSGAYKNVIG 10 20 30 40 50 60 70 80 90 100 110 120 MNA5.1 SLRAAWRIVSSIEQKEESRKNEEHVSLVKDYRSKVETELSSICSGILRLLDSHLIPSATA :::::::::::.:::::::::::::::::::::::::::::: ::::::::::::::::: 143K_A SLRAAWRIVSSLEQKEESRKNEEHVSLVKDYRSKVETELSSIFSGILRLLDSHLIPSATA 70 80 90 100 110 120 130 140 150 160 170 180 MNA5.1 SESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDTMIAYKAAQDVAVADLAPTHPIRLGLA ::::::::::::::::::::::::::::::::.:::::::::::::::::::::::::: 143K_A RESKVFYLKMKGDYHRYLAEFKSGDERKTAAEDAMIAYKAAQDVAVADLAPTHPIRLGLA 130 140 150 160 170 180 190 200 210 220 230 240 MNA5.1 LNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 143K_A LNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSD 190 200 210 220 230 240 MNA5.1 MQTVM :: : 143K_A MQEQMDEA Library scan: 0:00:00 total CPU time: 0:00:00