SSEARCH searches a sequence database using the Smith-Waterman algorithm version 2.0u54, July. 1996 Please cite: T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; W.R. Pearson (1991) Genomics 11:635-650 >MMN10.18 (Universal genetic code) : 429 aa vs library searching i51116 library 1110 residues in 1 sequences The best scores are: s-w I51116, 1110 bases, 15FB checksum. (1110) 282 >>I51116, 1110 bases, 15FB checksum. (1110 aa) Smith-Waterman score: 282; 23.830% identity in 470 aa overlap I51116 MSYTESSVTCSYRRAYADASRGGSKRLLSTPSSGFRSQSWCRGSSGGGSGSLVSLQRRPN 10 20 30 40 50 60 I51116 YASLSHGYSTPALNSAADSLDFMSQSSVFSGDFKHSRVNEKQLLQDLNDRFAGYIEKVHD 70 80 90 100 110 120 I51116 LEQKNKELETEISAYRQKQSGPARGGGVSDVYEQEIKELRDVIDDINGEKTTVQIEQEHL 130 140 150 160 170 180 I51116 DEEIQRLREKTDDEVRLRNETEALINAFRKNVDDTSLVRMEMDKRTQSLLDEITFLKKNH 190 200 210 220 230 240 I51116 EEEVDELLAQIQSSTVSVERKDFAVPEITAALREIRGQLEGQSARNIETAEEWFKGKFSQ 250 260 270 280 290 300 10 20 30 40 MMN10. MIAK--VLKKKRFHKEAVR-VEL--LSAGDTFSLEQPLSEDCMKWDRL :: . ...: : .: .:: : :: :::. ::: :. .: I51116 LTEAAEQNNDAIRSAKEEITEHRR--KLQMRCTELDAL-AGTKESLERQLSE--ME-ERH 310 320 330 340 350 50 60 70 80 MMN10. SSGEGDMLLDDLAKAFDAT--NV---VA-H-K------SSK-AID-----FTSVLDG--- .: :. :.: :. .. :. .: : . . : :.: . ..::: I51116 QSDVGN--LQDAAQQLENELRNTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLDGEEI 360 370 380 390 400 410 90 100 110 120 130 MMN10. ------LPKHGFRVKDIVGTESVTQPSAAKVIDTQVHSSN-QVS-ELRMATASSDDNLRE :: . : . :. .:.:::: . .: :.. ... : . .:. : .:.. I51116 RYSSGPLPTPA---KPP-KAPSA-KPKAAKV-EKKVVSKKPEIKVESEPISAQLDTDLED 420 430 440 450 460 140 150 160 170 180 MMN10. I--ETISQIDM--LMS-E-DDNKVEPTTNVLKEEAFALRKCSASHG--QGILVQNQTATP . : . . ..: : :... : . .::: : .. ..: .: . . : I51116 LAQEEVMEAKAAPVVSAEKDEEEEEEEEEKEEEEAEAEEEEEEDRGRKEG---EAE-AEE 470 480 490 500 510 520 190 200 210 220 230 240 MMN10. FTLTRCTKSEAA-SDVS-MNIESTSEGGSMSPSKSDHGIPQSPVEVNNMGNAAFEEEASV . . : :: ..: . : : :. . . .: .. .: :. : :: : I51116 EAEEEVEKEEAEEAEVEEAEAEET-EAEAAEEEEEAEGEEEAEAE----GEEA-EEAEEV 530 540 550 560 570 250 260 270 280 290 300 MMN10. DENSKERATTGHASNDEMHITESGHHASIDDEKHIPEPEHLTSIADEMKIDCSSEANHDE .:.. :.: ...:. : . : ..: ..:.. : :. . : : . .::. .: I51116 EEEAIEKAEAAEAKA-E--VEE--EEAEAEEEEE-EEAEE-EEVEAETKEEVEAEAEVEE 580 590 600 610 620 310 320 330 340 350 MMN10. YMEVTMED-QMHETGDSKIILPNLSSETTDLLSESGKSLSPDAVVQDHDEASRLESD--- :.. :. . .:. . .. . ... ... : ... .: . ..::. : : I51116 EGEAAEEEAEEEEAEEEEVTSKKAKTQEAEVEEEEAEAAEAEAEEEAEEEAG--EEDVEA 630 640 650 660 670 680 360 370 380 390 400 410 MMN10. ETKLEEEASVPNHNTFEITMEDNKVEELTIEDEKVEKTETEASHQAQVQSSENNNDTKSG :.: ::: ... : :....:: ...:.: :...: . .:... ... ... I51116 ESKEEEE-----EDSKEADAEEDEAEEEEVKEEEVTKSDAEEA-EAEAEEEAAKSEEEAA 690 700 710 720 730 740 420 MMN10. TRSKFPHLQI ..: I51116 EEAKDEAEEEEAEEEAVEETEAATEEAEAKEASDDEKPEEEVKESEAPVAPEAKKAPEPK 750 760 770 780 790 800 I51116 AAPKKKAPAKVESPTSEPEDEPKAEVVEKKGKAEAPKPKAKPAAAKKEAKPVEKEEEPEE 810 820 830 840 850 860 I51116 SPTEEEPKKPAAAKPAKAPAKPKPAPKAEAEEKPEPAKPAQAKPAPAAEEEEDEKEDDEE 870 880 890 900 910 920 I51116 EEEEVEEVKPEDAKPVKSKPAPAKEEEDEPKPAKQPPKPKRKPARPKEEPEDKAEPAKEK 930 940 950 960 970 980 I51116 HSPVEERKPIKEIAKPAKAAPAKADKEPEAAEPKKIEVKVKKVTKKVVEEIEQSTQQEES 990 1000 1010 1020 1030 1040 I51116 YEEIIEETIVSTKKVEKVAAPSKEPKKAVKVKEAPKAVAQVEEYEEIIEETVVSTTKKHE 1050 1060 1070 1080 1090 1100 I51116 KGKAPVDSK 1110 Library scan: 0:00:00 total CPU time: 0:00:00