SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MMN10.17 (Universal genetic code) : 261 aa
 vs  library
 searching hsu77665 library

    268 residues in     1 sequences
The best scores are:                              s-w
HSU77665, 268 bases, F28 checksum.                 (268) 459

>>HSU77665, 268 bases, F28 checksum.                 (268 aa)
Smith-Waterman score: 459;   35.827% identity in 254 aa overlap

                10        20        30        40          50       
MMN10. MGFF-DLSIPYNEPPRSGGKEIAGGKTLRLKLATKAMELGY--VGIAHNRSIKGVMSDKD
       :. : ::..      :.:. ..   :.::  :.  : .:::  :.: :  ..:     :.
HSU776 MAVFADLDL------RAGS-DL---KALR-GLVETAAHLGYSVVAINHIVDFK---EKKQ
                     10             20        30        40         

        60        70        80        90       100       110       
MMN10. SCTIPLLTLGSLIKVAPRLASSVGFHRDLLGVPRTTPFRQYTRLTVHVESNAQCQSLNSG
           :. ... :. . :     .     . :  .. :..  ::::. : . ..:. : . 
HSU776 EIEKPV-AVSELFTTLP-----I-----VQG--KSRPIKILTRLTIIVSDPSHCNVLRAT
         50         60                    70        80        90   

       120       130       140       150       160       170       
MMN10. NPILKSYDIIAVRPMNQNAFDYACEKAEVDLISIDFTDKMLFRLKHPMVKAAIQRGIYFE
       .   . ::..:: : ... :  :: . .:::. :  :.:. : .:.: ...::.::. ::
HSU776 SSRARLYDVVAVFPKTEKLFHIACTHLDVDLVCITVTEKLPFYFKRPPINVAIDRGLAFE
           100       110       120       130       140       150   

       180       190        200       210       220       230      
MMN10. IKYSDILMDAQTRRQVISNAKL-LVDWTRGKNLIISSGAPSVTELRGPNDVINLMFLLGL
       . ::  . :.  :: .::.: : :..  .:::.::::.:    :.::: :: :: .:.::
HSU776 LVYSPAIKDSTMRRYTISSA-LNLMQICKGKNVIISSAAERPLEIRGPYDVANLGLLFGL
           160       170        180       190       200       210  

        240       250       260                                
MMN10. SAERARAAISKNCRYVSNSSSNCVI                               
       :   :.::.: :::                                          
HSU776 SESDAKAAVSTNCRAALLHGETRKTAFGIISTVKKPRPSEGDEDCLPASKKAKCEG
            220       230       240       250       260        

Library scan:  0:00:00  total CPU time:  0:00:00