Gene organization of MMN10 (84325 bp)
Chromosome V 22-24 Mb   FTP   Reference   Kazusa Status  
Gene organization of MMN10
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MMN10.1
-
10365..12637 5 0 cucumisin-like serine protease (ARA12)
MMN10.2
+
16540..17025 1 1 zat12 gene
MMN10.3
-
20920..22516 8 2 ras-related protein ara-3
MMN10.4
-
25969..26551 3 6 40s ribosomal protein S15a
MMN10.5
+
27291..27913 3 0 chromosome 19, cosmid R33114
MMN10.6
-
29075..29611 2 4 histone H2a
MMN10.7
+
34604..35092 2 8 actin depolymerizing factor 1 (AtADF1)
MMN10.8
+
36574..37060 2 4 actin depolymerizing factor 1 (AtADF1)
MMN10.9
-
37453..40173 1 0 chromosome 4, BAC clone T5K18 (ESSAII project)
MMN10.10
+
40673..41122 1 3 histone H2B
MMN10.11
+
42223..44352 1 0 BAC IG002N01
MMN10.12
+
47993..49960 1 0 BAC IG002N01
MMN10.13
+
50879..52831 1 0 BAC IG002N01
MMN10.14
+
53702..54429 3 1 transcriptional coactivator ALY
MMN10.15
+
54523..54968 2 1 transcriptional coactivator ALY
MMN10.16
-
59822..60130 1 5 Histone H4 homologue
MMN10.17
+
60674..61740 4 0 Human RNaseP protein p30 (RPP30)
MMN10.18
+
61791..63077 1 0 NF-180
MMN10.19
-
64676..66551 3 0 chromosome II BAC F4P9 genomic sequence
MMN10.20
+
73923..78219 13 0 RbohAp108
MMN10.21
+
81539..83687 6 1 high-pI laccase (LAC2-4)


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MMN10.P1
+
25093..25272 1 0 GAST1 protein precursor
MMN10.P2
-
28431..28505 1 0 Rat CIRP
MMN10.P3
+
50395..50445 1 0 BAC IG002N01


transcribed regions

identifier direction position Definition of the most similar sequence

MMN10.T1
+
6162..6463 Lambda-PRL2 cDNA clone 151H10T7
MMN10.T2
+
14956..14966 Lambda-PRL2 cDNA clone 179P13T7
MMN10.T3
+
33968..34197 Lambda-PRL2 cDNA clone 119C18T7
MMN10.T4
+,-,-,-,-,-
55503..58770 Lambda-PRL2 cDNA clone 37D8TT
Lambda-PRL2 cDNA clone 205E14XP 3'
Lambda-PRL2 cDNA clone 205E14T7
Lambda-PRL2 cDNA clone 37D8T7
Lambda-PRL2 cDNA clone 116N12T7
Lambda-PRL2 cDNA clone 96P12T7


potential RNA genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MMN10.R1
-
53413..53486 1 0 tRNA-Val(AAC)


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. VII. Sequence Features of the Regions of 1,013,767 bp Covered by 16 Physically assigned P1 and TAC Clones (1998) Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Hirokazu Kotani, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 297-308
o Kazusa Status