SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MLF18.9 (Universal genetic code) : 275 aa
 vs  library
 searching gi:3885338 library

    260 residues in     1 sequences
The best scores are:                              s-w
gi|3885338                                         (260) 459

>>gi|3885338                                         (260 aa)
Smith-Waterman score: 459;   32.601% identity in 273 aa overlap

                                 10        20           30         
MLF18.                   MSDHQKIHPVSDPEAPPHPTAPL--VPRGS-SRSEHGDPTKT
                                 : . : ::: :.. .  ::. .  :     : ..
gi|388 MAERVYPADSPPQSGQFSGNFSSGEFP-KKP-APP-PSTYVIQVPKDQIYRIP--PPENA
               10        20         30          40        50       

      40        50         60        70        80        90        
MLF18. QQAAPLDPPREKKGSRS-CWCRCVCYTLLVLFLLIVIVGAIVGILYLVFRPKFPDYNIDR
       ..   :.  : :: .:: : : : :  : ..:.:::..:   ..:::..::. : :.:. 
gi|388 HRFEQLS--R-KKTNRSNCRC-CFCSFLAAVFILIVLAGISFAVLYLIYRPEAPKYSIEG
          60           70         80        90       100       110 

      100       110       120       130       140       150        
MLF18. LQLTRFQLNQDLSLSTAFNVTITAKNPNEKIGIYYEDGSKISVLYMQTRISNGTLKIKIC
       .... ..::.   .: .::::. ..: : :::.:::  :...: :      :        
gi|388 FSVSGINLNSTSPISPSFNVTVRSRNGNGKIGVYYEKESSVDVYY------ND-------
             120       130       140       150                     

      160       170       180       190        200       210       
MLF18. SFGRFKLVQIVKPDFVISTGSLPKFYQGHENTTII-LVEMTGFTQNATSLMTTLQEQQR-
                 :  :  ::.: .: :::  .:.:.. :: ..: ..   .: . .....: 
gi|388 ----------V--D--ISNGVMPVFYQPAKNVTVVKLV-LSG-SK--IQLTSGMRKEMRN
                  160         170       180           190       200

          220       230       240         250       260       270  
MLF18. -LTG-SIPLRIRVTQPVRIKLGKLKL--MKVRFLVRCGVSVDSLAANSVIRVRSSNCKYR
        ..  ..:.....  ::.::.:..:   : :   : : :.::.:.: :  :. : .:.. 
gi|388 EVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVN--VDCDVTVDKLTAPS--RIVSRKCSHD
              210       220       230         240         250      

           
MLF18. FRL 
           
gi|388 VDLW
        260

Library scan:  0:00:00  total CPU time:  0:00:00