SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MLF18.10 (Universal genetic code) : 196 aa
 vs  library
 searching gi:3193300 library

    870 residues in     1 sequences
The best scores are:                              s-w
gi|3193300                                         (870) 576

>>gi|3193300                                         (870 aa)
Smith-Waterman score: 576;   44.898% identity in 294 aa overlap

               10        20        30                          40  
MLF18. MGEKRRTTSKTLAKNNKRKGPYLPNSILKIIANEKRPL------------------YEYE
       :::::..::::::::.:::::.::::::: ::::::::                  ::::
gi|319 MGEKRKSTSKTLAKNKKRKGPHLPNSILKTIANEKRPLNSDEDDDEIDSDDENVDLYEYE
               10        20        30        40        50        60

             50                     60                70        80 
MLF18. EGVPEEESKKNNRYDR-------------DETVESNDD-D-------EAEGDDDRHTRML
       ::::::::::::::::             ::.:::.:: :       :.:::::::::::
gi|319 EGVPEEESKKNNRYDRVDNYDYELPEDFEDENVESDDDEDGGNSENEEGEGDDDRHTRML
               70        80        90       100       110       120

              90                                                   
MLF18. QGLTGMPSAAFQE----------------------D------------------------
       :::::::::::::                      :                        
gi|319 QGLTGMPSAAFQEESKKRPVLYTEAYPESEFNPTRDVLEGKGLISVEDLLAPLEGKPGFN
              130       140       150       160       170       180

               100       110       120       130          140      
MLF18. ------QRMRKDTQSVVHAPLHKPERERLEGKAVKGLVYNLRNIMNW-SFV--GLE--TL
             .::.::::::::::: :::::::: :::::::   ... .:  .:  . :  :.
gi|319 DLNKRINRMQKDTQSVVHAPLPKPERERLERKAVKGLVE--KDFNKWVHLVKRNREAPTV
              190       200       210         220       230        

          150         160         170       180         190        
MLF18. QIDHGLFGNVVY--VKAY--HFDDSNRKVKVERNQSRFKVVK-KEM-EFNRYRGNPKE  
        ... .  :: :  : :   .:.   : .. :....  .:.: .:. : ..  :      
gi|319 YFNQPV--NVGYSTVGAIASEFQP--R-TEFEKKMA--SVLKDNELGEAHKEDGAKLLEL
      240         250       260            270       280       290 

gi|319 NEASSVSMEDHIKYRDHIAKMRSLLFRHELKSKRIKKIKSKTYHRLKGKDLKKSAMGALM
             300       310       320       330       340       350 

gi|319 DPEMAKEEAIKQETRRVEERMTLKHKNTGKWAKRMLSRGLTERYDGTRAAISEQLQINAT
             360       370       380       390       400       410 

gi|319 LSRKMNSTNDGSSSDESDDEEELSCGSDQDTPSKLIAKAREKTLKTMEDDDVPNSGLLSL
             420       430       440       450       460       470 

gi|319 PFMARAMKKKNEEANEEAKRAFGEYKELENFGGEDNPKKSADVSGRRVFGATSKVEAPKE
             480       490       500       510       520       530 

gi|319 SKKDSDNFYDNSDSDNDMEGIENNDLGAVGDTASPARNTGAITETEKCCGDVENPASKTT
             540       550       560       570       580       590 

gi|319 FDVALFASGSWKKMKGSQNAESKKAPKTRVPISKGQDKKESRDEESEDSESEAEQMVDGI
             600       610       620       630       640       650 

gi|319 LTSASKETYEIPSQAELIQRAFAGDDVVEEFEKDKQEVLNQEVPEPEKPVLVPGWGQWTN
             660       670       680       690       700       710 

gi|319 VQKKRGLPSWMVREHEDANKKRKLDLKTRKDYRLRNVIISEKVDKKADKLHTTTLPFPYT
             720       730       740       750       760       770 

gi|319 SKEVFEHSMRMPIGPEFNPATIVGALNRPEVPFYYLLNSLHHVVKKAGVIIKPVKFEEVN
             780       790       800       810       820       830 

gi|319 PNEKADDENPRSHQKQRPKKGSKTSKGQGKNKSKLKTKA
             840       850       860       870

Library scan:  0:00:00  total CPU time:  0:00:00