SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MLE8.P1 (Universal genetic code) : 414 aa
 vs  library
 searching humhl1115b library

    349 residues in     1 sequences
The best scores are:                              s-w
HUMHL1115B, 349 bases, 1F82 checksum.              (349) 708

>>HUMHL1115B, 349 bases, 1F82 checksum.              (349 aa)
Smith-Waterman score: 708;   34.366% identity in 355 aa overlap

               10         20         30        40        50        
MLE8.P CLEDIDAQEAKSLAIY-KDGK-HATLPFPDDKSFPHEPVGRLLRNGRLVQRLRQKAASLS
           .::: ...  :. ...: .. .:.: ...  .   :: ...::... ::. : .  
HUMHL1     LDAQVVNGYMIHDQESKSEVQIPYPLSEN-NQVQSGRAFHHGRFIMSLRKAAMAEP
                   10        20         30        40        50     

       60        70        80         90        100       110      
MLE8.P NVQLEEGTVKSLIEEEGVVKGVTYKNS-AGEEITAF-APLTVVCDGCYSNLRRSLVDNTE
       :...  :.: .:.::. :: :: ::.. .:. :  . :::::: :: .:..:.:::.:  
HUMHL1 NAKFIGGVVLQLLEEDDVVMGVQYKDKETGD-IKELHAPLTVVADGLFSKFRKSLVSNKV
          60        70        80         90       100       110    

        120       130        140       150       160       170     
MLE8.P EVLSYMVGYVTKNS-RLEDPHSLHLIFSKPLVCVIYQITSDEVRCVAEVPADSIPSISNG
        : :..::.. ::. ...  :. .::...:   .::::.:.:.: .... .. .:   : 
HUMHL1 SVSSHFVGFLMKNAPQFKANHA-ELILANPSPVLIYQISSSETRVLVDIRGE-MP--RN-
          120       130        140       150       160             

         180       190       200       210       220       230     
MLE8.P EMSTFLKKSMAPQIPETGNLREIFLKGIEEGLPEIKSTATKSMSSRLCDKRGVIVLGDAF
        .  .. ... ::::.  .:.: ::.. ...  ...:  .. .      ::::..::::.
HUMHL1 -LREYMVEKIYPQIPD--HLKEPFLEATDNS--HLRSMPASFLPPSSVKKRGVLLLGDAY
      170       180         190         200       210       220    

         240       250       260       270       280        290    
MLE8.P NMRHPIIASGMMVALSDICILRNLLKPLPNLSNTKKVSDLVKSFYIIRKP-MSATVNTLA
       :::::. ..:: ::..:: . :.::: .:.: .   . .  ::::  ::   : .:: ::
HUMHL1 NMRHPLTGGGMTVAFKDIKLWRKLLKGIPDLYDDAAIFEAKKSFYWARKTSHSFVVNILA
          230       240       250       260       270       280    

          300       310       320       330       340       350    
MLE8.P SIFSQVLVATTDEAREGMRQGCFNYLARGDFKTRGLMTILGGMNPHPLTLVLHLVAITLT
       . . ... :: :.. . .:..:: :.  :   . : . .:. ..:.::.:. :. :... 
HUMHL1 QALYELFSAT-DDSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLVLIGHFFAVAIY
          290        300       310       320       330       340   

          360       370       380       390       400       410    
MLE8.P SMGHLLSPFPSPRRFWHSLRILAWALQMLGAHLVDEGFKEMLIPTNAAAYRRNYIATTTV
                                                                   
HUMHL1 AVYFCF                                                      
                                                                   

Library scan:  0:00:00  total CPU time:  0:00:00