SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MKM21.P2 (Universal genetic code) : 54 aa
 vs  library
 searching atfca715 library

   1184 residues in     1 sequences
The best scores are:                              s-w
ATFCA715, 1184 bases, 2059 checksum.               (1184) 208

>>ATFCA715, 1184 bases, 2059 checksum.               (1184 aa)
Smith-Waterman score: 208;   59.259% identity in 54 aa overlap

ATFCA7 MEIASSSGSRRYDVFPSFRGEDVRDSFLSHLLKELRGKAITFIDDEIERSRSIGPELLSA
               10        20        30        40        50        60

ATFCA7 IKESRIAIVIFSKNYASSTWCLNELVEIHKCYTNLNQMVIPIFFHVDASEVKKQTGEFGK
               70        80        90       100       110       120

ATFCA7 VFEETCKAKSEDEKQSWKQALAAVAVMAGYDLRKWPSEAAMIEELAEDVLRKTMTPSDDF
              130       140       150       160       170       180

ATFCA7 GDLVGIENHIEAIKSVLCLESKEARIMVGIWGQSGIGKSTIGRALYSKLSIQFHHRAFIT
              190       200       210       220       230       240

ATFCA7 YKSTSGSDVSGMKLRWEKELLSEILGQKDIKIEHFGVVEQRLKQQKVLILLDDVDSLEFL
              250       260       270       280       290       300

ATFCA7 KTLVGKAEWFGSGSRIIVITQDRQLLKAHEIDLIYEVEFPSEHLALTMLCRSAFGKDSPP
              310       320       330       340       350       360

ATFCA7 DDFKELAFEVAKLAGNLPLGLSVLGSSLKGRTKEWWMEMMPRLRNGLNGDIMKTLRVSYD
              370       380       390       400       410       420

ATFCA7 RLHQKDQDMFLYIACLFNGFEVSYVKDLLKDNVGFTMLTEKSLIRITPDGYIEMHNLLEK
              430       440       450       460       470       480

ATFCA7 LGREIDRAKSKGNPGKRRFLTNFEDIHEVVTEKTGTETLLGIRLPFEEYFSTRPLLIDKE
              490       500       510       520       530       540

ATFCA7 SFKGMRNLQYLEIGYYGDLPQSLVYLPLKLRLLDWDDCPLKSLPSTFKAEYLVNLIMKYS
              550       560       570       580       590       600

ATFCA7 KLEKLWEGTLPLGSLKEMNLRYSNNLKEIPDLSLAINLEELDLVGCKSLVTLPSSIQNAT
              610       620       630       640       650       660

ATFCA7 KLIYLDMSDCKKLESFPTDLNLESLEYLNLTGCPNLRNFPAIKMGCSDVDFPEGRNEIVV
              670       680       690       700       710       720

ATFCA7 EDCFWNKNLPAGLDYLDCLTRCMPCEFRPEQLAFLNVRGYKHEKLWEGIQSLGSLEGMDL
              730       740       750       760       770       780

ATFCA7 SESENLTEIPDLSKATKLESLILNNCKSLVTLPSTIGNLHRLVRLEMKECTGLEVLPTDV
              790       800       810       820       830       840

ATFCA7 NLSSLETLDLSGCSSLRSFPLISTNIVWLYLENTAIEEIPSTIGNLHRLVRLEMKKCTGL
              850       860       870       880       890       900

ATFCA7 EVLPTDVNLSSLETLDLSGCSSLRSFPLISESIKWLYLENTAIEEIPDLSKATNLKNLKL
              910       920       930       940       950       960

ATFCA7 NNCKSLVTLPTTIGNLQKLVSFEMKECTGLEVLPIDVNLSSLMILDLSGCSSLRTFPLIS
              970       980       990      1000      1010      1020

                                                                   
MKM21.                                                    IDLSGCSKL
                                                          .::::::.:
ATFCA7 TNIVWLYLENTAIEEIPSTIGNLHRLVKLEMKECTGLEVLPTDVNLSSLMILDLSGCSSL
             1030      1040      1050      1060      1070      1080

      10        20        30        40        50                   
MKM21. KSFPDISSNISCLCLNQTGIEEVPLWIENFVRLTYLTMVECKKLK               
       ..:: ::. : :: :..:.:::::  ::.:.::: : :  :..::               
ATFCA7 RTFPLISTRIECLYLQNTAIEEVPCCIEDFTRLTVLMMYCCQRLKTISPNIFRLTRLELA
             1090      1100      1110      1120      1130      1140

ATFCA7 DFTDCRGVIKALSDATVVATMEDHVSCVPLSENIEYIWDKLYPL
             1150      1160      1170      1180    

Library scan:  0:00:00  total CPU time:  0:00:00