SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MKD10.P1 (Universal genetic code) : 42 aa
 vs  library
 searching ataf00130816 library

    580 residues in     1 sequences
The best scores are:                              s-w
ATAF00130816, 580 bases, 42B checksum.             (580) 232

>>ATAF00130816, 580 bases, 42B checksum.             (580 aa)
Smith-Waterman score: 232;   80.952% identity in 42 aa overlap

                              10        20        30        40     
MKD10.                DDQEEEEEKGVDVRAEEFIAKFYEQMKLQRQISYLQYKEHND   
                      :..  ::::::::::::::::::::.:::::.:::.::.:::   
ATAF00 MDGQDYSDEVQSYGYDESCSEEEKGVDVRAEEFIAKFYEQIKLQRQVSYLKYKQHNDAYM
               10        20        30        40        50        60

ATAF00 TMDSEGVLMPLVHEHLMMPWNDLRKGDCCGLSKAVSVGYYCKSCDFFAHKKCGESSEFIQ
               70        80        90       100       110       120

ATAF00 HPSHPNHTLQLRSSEGCNSCNLCGRTISDLFYRCDLCDFDVDLYCAKYPPPEVIDIPETH
              130       140       150       160       170       180

ATAF00 HHKLNLHKELIEFNCDAKCGKITGAEFPYVCYECQLPFHVDCVWRPSELKHPSEHDHRVS
              190       200       210       220       230       240

ATAF00 RTSVPGVGNSKGVLLPWFHRKHIMMPWNDMRKGDCCGSLESVTDGFYCKSCDIFIHKKCG
              250       260       270       280       290       300

ATAF00 ESSGIIDHSSHPDHTLELNRYPNKSCNLCGRSKGVNVCYRCDHCYYQLDLYCAKYPPPEF
              310       320       330       340       350       360

ATAF00 IDIPETHHHKLTLLKERIEFDCDAKCGETGDGFAYKCPECDLFFHVDCVWHPPERCSSYV
              370       380       390       400       410       420

ATAF00 VHSKCATRRDVWNGKELEGVPEEIEDIEPYVLLTRLNSFSVLLVIDGPMVSGTNMDISHS
              430       440       450       460       470       480

ATAF00 IFSVVQYPSHLSIQAIPIIPYITLYWMEGMRFVMAAKRVGIMPKSTIMGWYKYYEVVLNN
              490       500       510       520       530       540

ATAF00 SISRPVCEMCKSRCIFPTIMKILEASNEYVCSLACVLERG
              550       560       570       580

Library scan:  0:00:00  total CPU time:  0:00:00