SSEARCH searches a sequence database
using the Smith-Waterman algorithm
version 2.0u54, July. 1996
Please cite:
T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197;
W.R. Pearson (1991) Genomics 11:635-650
>MIK19.9 (Universal genetic code) : 439 aa
vs library
searching ill2_arath library
439 residues in 1 sequences
The best scores are: s-w
ILL2_ARATH, 439 bases, 7A4 checksum. (439)2832
>>ILL2_ARATH, 439 bases, 7A4 checksum. (439 aa)
Smith-Waterman score: 2832; 99.544% identity in 439 aa overlap
10 20 30 40 50 60
MIK19. MALNKLLSLTFQLLLFLLSVSSESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ILL2_A MALNKLLSLTFQLLLFLLSVSSESPWIAEDTSQIQTKLLEFAKSPEVFDWMVKIRRKIHE
10 20 30 40 50 60
70 80 90 100 110 120
MIK19. NPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ILL2_A NPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADMDALPIQE
70 80 90 100 110 120
130 140 150 160 170 180
MIK19. GVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKK
:::::::::: :::::::::::::::::::::::::::::::::::::::::::::::::
ILL2_A GVEWEHKSKIPGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKK
130 140 150 160 170 180
190 200 210 220 230 240
MIK19. MREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTID
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::
ILL2_A MREEGALKNVEAIFGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPHHTID
190 200 210 220 230 240
250 260 270 280 290 300
MIK19. PVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ILL2_A PVVAASSIVLSLQQLVSRETDPLDSKVVTVSKVNGGNAFNVIPDSITIGGTLRAFTGFTQ
250 260 270 280 290 300
310 320 330 340 350 360
MIK19. LQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ILL2_A LQQRVKEVITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVE
310 320 330 340 350 360
370 380 390 400 410 420
MIK19. AAPVMGSEDFSYFAETIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
ILL2_A AAPVMGSEDFSYFAETIPGHFSLLGMQDETNGYASSHSPLYRINEDVLPYGAAIHASMAV
370 380 390 400 410 420
430
MIK19. QYLKEKASKGSVSGFHEEL
:::::::::::::::::::
ILL2_A QYLKEKASKGSVSGFHEEL
430
Library scan: 0:00:00 total CPU time: 0:00:01