SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MIK19.16 (Universal genetic code) : 328 aa
 vs  library
 searching hasf21 library

    352 residues in     1 sequences
The best scores are:                              s-w
HASF21, 352 bases, 716 checksum.                   (352)1400

>>HASF21, 352 bases, 716 checksum.                   (352 aa)
Smith-Waterman score: 1400;   61.690% identity in 355 aa overlap

                10        20        30        40        50         
MIK19. MTDSYG-AVSVDVGTIYLGGKEHRVKTASGVVSVIVYGDREKPALITYPDLALNHMSCFQ
       :.:: : ..::   ... ::::: ..:. : ::: : ::.::: ::::::::::::::::
HASF21 MADS-GHSISVTFPSFHSGGKEHIIRTGCGSVSVTVCGDQEKPPLITYPDLALNHMSCFQ
                10        20        30        40        50         

      60        70        80        90       100       110         
MIK19. GLFFCPEAASLLLHNFCIYHISPPGHELGAAPICPNDSVPSAENLADQILEVLNFFGLGV
       :::  ::.:::::::::::::.::::::::: :  .: ::: :.: :::: :::.: :: 
HASF21 GLFVSPESASLLLHNFCIYHINPPGHELGAASIGIDDPVPSIEDLCDQILVVLNYFRLGS
      60        70        80        90       100       110         

     120       130       140       150       160                   
MIK19. VMCMGVTAGAYILTLFAMKHRERVLGLILVSPLCKAPSWSEWFYNK--------------
       :::::. :::::::::..:. ::: ::::.::.::::::.: ::::              
HASF21 VMCMGAMAGAYILTLFSIKYSERVTGLILISPICKAPSWTERFYNKLTSKTLYYYGMCDL
     120       130       140       150       160       170         

                     170       180       190       200       210   
MIK19. ------------EVRGNVEIPESDIAQACRRLLDERQGINVLRFLDAIDRRPDISSGLKK
                   :: :: ::::::.. :::.:::::...:: :.:.::: : ::.  ::.
HASF21 VKELLIHRYFSKEVCGNPEIPESDMVLACRKLLDERDSVNVWRYLQAIDSRRDITEELKS
     180       190       200       210       220       230         

           220       230       240         250       260       270 
MIK19. LKCRTLIFIGDQSPFYSEAVHMAATLDRGY-C-ALVEMFSWKYYQVQACGSMVTEEQPHA
       :.:.:.::.::.:::..::...:  :  :  : ::::        :.:::::::.:::::
HASF21 LECKTIIFVGDSSPFHDEALQIAEKL--GTNCSALVE--------VHACGSMVTQEQPHA
     240       250       260         270               280         

             280       290       300       310       320           
MIK19. MLIPMEYFLMGYGLYRPSLFSESPRSPLSPSCISPELLSPESMGLKLKPIKTRISAA   
       ::::.: :: :.:::::  .:.::::::.:: :.:::: ::.:::::.::: :.:     
HASF21 MLIPLENFLKGFGLYRPCRYSNSPRSPLGPSSIDPELLYPEKMGLKLRPIKLRVSPQPRA
     290       300       310       320       330       340         

HASF21 HKN
     350  

Library scan:  0:00:00  total CPU time:  0:00:00