SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MIJ24.13 (Universal genetic code) : 189 aa
 vs  library
 searching s71284 library

    305 residues in     1 sequences
The best scores are:                              s-w
S71284, 305 bases, 1737 checksum.                  (305) 286

>>S71284, 305 bases, 1737 checksum.                  (305 aa)
Smith-Waterman score: 286;   30.928% identity in 194 aa overlap

               10        20        30        40         50         
MIJ24. MHQEEKKKKHRGGHWTLSEDLKLKELVAVFGPQNWKFIGEKMEP-RTSLSCRQRWFNQLD
                   : :.  :: .:..::. .::.::  :.... : :.. ::: :: :::.
S71284       MADRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSI-PGRSGKSCRLRWCNQLS
                     10        20        30         40        50   

      60        70        80        90           100        110    
MIJ24. PKINKRNFTDEEEEKLLRAHILYGSVSHESTN---LNAQYLQE-KNY-SSCMPLQHSC--
       :....: :. ::.: . :::  .:  .. .:    ::..  .  ::. .:   :...:  
S71284 PQVEHRPFSAEEDETIARAHAQFG--NKWATIARLLNGRTDNAVKNHWNST--LKRKCGG
            60        70          80        90       100           

                 120        130           140       150        160 
MIJ24. HHHH-F--ST--FPAN-SLALFTPHVSIS----QPSSSSLLSSSEAEDIMTTKT-PRAFT
       . :. .  :    :.. :..  .: : ..    .:.:    ..:.. :  :    : .  
S71284 YDHRGYDGSEDHRPVKRSVSAGSPPV-VTGLYMSPGSP---TGSDVSDSSTIPILPSVEL
     110       120       130        140          150       160     

             170       180                                         
MIJ24. FLRKLLKLGSLSLAYVWPCMPTIQISIR                                
       : . . . :    : : : .: :. :                                  
S71284 F-KPVPRPG----AVVLP-LP-IETSSFSDDPPTSLSLSLPGADVSEESNRSHESTNINN
          170            180        190       200       210        

S71284 TTSSRHNHNNTVSFMPFSGGFRGAIEEMGKSFPGNGGEFMAVVQEMIKAEVRSYMTEMQR
      220       230       240       250       260       270        

S71284 NNGGGFVGGFIDNGMIPMSQIGVGRIE
      280       290       300     

Library scan:  0:00:00  total CPU time:  0:00:00