SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MDK4.9 (Universal genetic code) : 321 aa
 vs  library
 searching s76774 library

    248 residues in     1 sequences
The best scores are:                              s-w
S76774, 248 bases, 617 checksum.                   (248) 658

>>S76774, 248 bases, 617 checksum.                   (248 aa)
Smith-Waterman score: 658;   53.333% identity in 210 aa overlap

               10        20        30        40        50        60
MDK4.9 MNLSVNRCITGGFVGGFSSCRLNHEKRWVRAGKHCELERERSLVSDAVSLERLESKSIKL

               70        80        90       100       110       120
MDK4.9 AMLASGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGDSVGNFLYSANQQANEA
                                                   :. : :.  .: :.. 
S76774                                          MWQSLQNQLFFLQQWADRL
                                                        10         

              130       140       150       160       170       180
MDK4.9 VQDQLSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKSRGQVIGDTVAFA
       : .::. :.  :: .:. :::::::.:: ::.::::..:::.   : .: : . ... ::
S76774 VVEQLGQLTPLSLLIILLAGLVTSLTPCLLSLLPLTIAYIGGTTEG-DRLQSLRQSLWFA
      20        30        40        50        60         70        

              190       200       210       220       230       240
MDK4.9 LGLATTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLLEIIELQLPSFFNNFDP
       :::: ::: ::. :.  :: ::::: :::. .: .::.:::::::.. ::.::. .  : 
S76774 LGLAITLASLGLGAAALGKIYGQIGLGLPILVSLVAILMGLNLLELLPLQFPSL-GATD-
       80        90       100       110       120       130        

              250       260       270       280       290       300
MDK4.9 RAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPVIGGSLLLTYTTGYV
            .:: ...: ::::::.: ::::::::::.::..::. .: ..:..:::.::.:::
S76774 -WIKDDFPPALRALLAGLTFGLIASPCSTPVLASLLAWVASRQDLLLGSGLLLAYTVGYV
         140       150       160       170       180       190     

              310       320                                 
MDK4.9 APLIVAASFAGALQVVSFKTK                                
       ::::... :::.:.                                       
S76774 APLILVGLFAGSLKRLLQLRQWSGWLNPLSGTILLGFGVITLLSRLPLGQWLS
         200       210       220       230       240        

Library scan:  0:00:00  total CPU time:  0:00:00