Gene organization of MDJ22 (77363 bp)
Chromosome V 6-8 Mb   FTP   Reference   Kazusa Status  
Gene organization of MDJ22
figure legend

potential protein genes
identifier direction position No. of
exon		 No. of
EST		 Definition of the most similar sequence
MDJ22.1
+
1496..2313 2 0 cell surface-binding protein
MDJ22.2
-
14212..16701 7 2 Synechocystis sp. PCC6803 slr1124 (phosphoglycerate mutase)
MDJ22.3
+
21123..22397 1 1 prephenate dehydratase (EC 4.2.1.51)
MDJ22.4
+
37847..41363 5 0 TMV resistance protein N
MDJ22.5
-
61855..67349 20 0 dna repair protein rad8

potential exons
identifier direction position No. of
exon		 No. of
EST		 Definition of the most similar sequence
MDJ22.P1
+
11677..11887 1 0 Caenorhabditis elegans cosmid K04A8
MDJ22.P2
+
13458..13619 1 0
MDJ22.P3
-
55112..55694 2 1 Acetobacter xylinum cellulose synthase
MDJ22.P4
-
77255..77363 1 1 alpha-adaptin

transcribed regions
identifier direction position Definition of the most similar sequence
MDJ22.T1
+
25909..26443 clone TAP0356; 5' end
CD4-16 cDNA clone H1C10T7
MDJ22.T2
-
28969..29332 clone TAP0356; 3' end
MDJ22.T3
-
29715..30189 CD4-16 cDNA clone H9H3T7
MDJ22.T4
+
31030..31244 clone TAT6B01; 5' end; Similar toATTS0396
clone 133F15T7
MDJ22.T5
+
31535..31712 clone 117P21T7
MDJ22.T6
+
31819..32105 clone FAI214; 5' end
clone TAT4F5, 5' end
MDJ22.T7
-
32469..32732 clone TAT6B01; 3' end
MDJ22.T8
-
42666..43078 Lambda-PRL2 cDNA clone 200M20T7
clone 183D14T7
MDJ22.T9
+
51596..51896 clone FAFL51; 3' end
MDJ22.T10
+
70907..71588 CD4-16 cDNA clone H10F9T7

Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. II. Sequence Features of the Regions of 1,044,062 bp Covered by Thirteen Physically assigned P1 Clones. (1997) Hirokazu Kotani, Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 4, 291-300
o Kazusa Status