SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MDH9.16 (Universal genetic code) : 185 aa
 vs  library
 searching gi:2462834 library

    187 residues in     1 sequences
The best scores are:                              s-w
gi|2462834                                         (187) 867

>>gi|2462834                                         (187 aa)
Smith-Waterman score: 867;   70.053% identity in 187 aa overlap

                10         20        30        40        50        
MDH9.1 MAKRFLLLL-PLL-STILLLSVSVTESEAYSTTKPCQGYKPDKFTHLHFYFHDVISGDKP
       ::  ::::: ::. ::.:::...::.:. :: : : :: ::::.:::::::::.::::::
gi|246 MATPFLLLLLPLIFSTVLLLTITVTQSKPYSKTTPFQGNKPDKLTHLHFYFHDIISGDKP
               10        20        30        40        50        60

       60        70        80        90       100       110        
MDH9.1 TAVKVAEARRTNSSNVNFGVIMIADDPLTEGPDPSSKEVGRAQGMYALTAMKNISFTMVF
       :...::::  :::: . ::...:.: :.::::. ::::::::::.:: : ::...:::::
gi|246 TTIRVAEAPGTNSSATVFGAVLIVDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVF
               70        80        90       100       110       120

      120       130       140       150       160       170        
MDH9.1 NLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFARGYAQAKTYKVVGLDAVVE
       :..:: :::::::.:.:::: :. . ::.::::::: ::::::::  ::::::..:::::
gi|246 NFVFTEGEFNGSTAALYGRNPILLEERELPIIGGTGDFRFARGYALPKTYKVVNIDAVVE
              130       140       150       160       170       180

      180     
MDH9.1 YNVFIWH
       :::::::
gi|246 YNVFIWH
              

Library scan:  0:00:00  total CPU time:  0:00:00