SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MDH9.12 (Universal genetic code) : 388 aa
 vs  library
 searching gi:2708751 library

    391 residues in     1 sequences
The best scores are:                              s-w
gi|2708751                                         (391)2232

>>gi|2708751                                         (391 aa)
Smith-Waterman score: 2232;   84.655% identity in 391 aa overlap

               10        20        30        40        50        60
MDH9.1 MTIMSDLPRDLLAEILSRVPLTSLRAVRLTCKKWNDLSKDRSFLKKQIVETKKKQLESKE
          ::::::::::::::::::.:::.::.:::::::::::::::::::::.:::::.:::
gi|270    MSDLPRDLLAEILSRVPLASLRSVRFTCKKWNDLSKDRSFLKKQIVEAKKKQLKSKE
                  10        20        30        40        50       

               70        80        90       100       110       120
MDH9.1 IEVIMMRNFRVYLTSIDIHNNVDPSFTPKGTLISLSDDANHHQVDNVSRVFHCDGLLLCI
       .::::::::::::::.:.::.:.::::::::: :.:::::.::::::: :::::::::::
gi|270 FEVIMMRNFRVYLTSVDLHNDVNPSFTPKGTLTSFSDDANQHQVDNVSSVFHCDGLLLCI
        60        70        80        90       100       110       

              130       140       150       160       170          
MDH9.1 TKDLHYRLVVWNPYFGQTRWIQPRNSYHRKDNYALGYDEKKNHKILRLKDNYYA----PR
       ::::..:::::::::::::::::::::: :: ::.::::.::::::::::.::     ::
gi|270 TKDLNFRLVVWNPYFGQTRWIQPRNSYHIKDIYAIGYDENKNHKILRLKDQYYDYDSHPR
       120       130       140       150       160       170       

        180       190       200       210       220       230      
MDH9.1 ERICEFELYSFESNSWKVVLDVSPDWYIPSYNRGLSLKGNTYWYATEKHVNVDFLICFDF
        ::::::::::::::::::::::::::: ::.::::.::::::::::::  :.:::::::
gi|270 ARICEFELYSFESNSWKVVLDVSPDWYIHSYHRGLSVKGNTYWYATEKHGYVNFLICFDF
       180       190       200       210       220       230       

        240       250       260       270       280       290      
MDH9.1 TTEKFGPRLPLPFNATESPTYEDVVTLSSVGEEQLAVLFQSEYTLMMEIWVTSKVESTEV
       :::::::::::::::::: ::.::::::::::::::.::::. ::::::::::::. :::
gi|270 TTEKFGPRLPLPFNATESFTYDDVVTLSSVGEEQLALLFQSDATLMMEIWVTSKVDPTEV
       240       250       260       270       280       290       

        300         310       320       330       340       350    
MDH9.1 LWNKLFLEVD--LIAISSHFQFLAEAGSFFIDQKKNVVVVFDKDMDEATDRDMAYVVGKN
       ::::::: ::  .: .. ...:.:.::::::::::::::::::::.: : : :::.::::
gi|270 LWNKLFLAVDHDMIEFDYELKFVADAGSFFIDQKKNVVVVFDKDMNEHTHRGMAYIVGKN
       300       310       320       330       340       350       

          360       370       380        
MDH9.1 GYFKKVDIGEEAYTSCFPLVCSYVPSSEQIRQLT
       ::::.:::::::::::::::::::::: ::::::
gi|270 GYFKRVDIGEEAYTSCFPLVCSYVPSSVQIRQLT
       360       370       380       390 

Library scan:  0:00:00  total CPU time:  0:00:00