SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MDH9.10 (Universal genetic code) : 359 aa
 vs  library
 searching gi:2795805 library

    395 residues in     1 sequences
The best scores are:                              s-w
gi|2795805                                         (395) 767

>>gi|2795805                                         (395 aa)
Smith-Waterman score: 767;   40.615% identity in 325 aa overlap

               10        20        30        40        50          
MDH9.1 MDYQISLILATSISSIFLLLIVFTVVMIVCRRRPPIQNHPRRNRNFPDPDPDLNTE-TVT
                                                             ::  . 
gi|279              MGSCFSSRVKADIFHNGKSSDLYGLSLSSRKSSSTVAAAQKTEGEIL
                            10        20        30        40       

      60        70        80        90       100                   
MDH9.1 ESFDPSICEISMAELTIATKNFSSDLIVGDGSFGLVYRAQL--SN--------GVVVAVK
        :  : .  ... :: .::.::  : ..:.:.:: :... :  :.        :.:.:::
gi|279 SS-TP-VKSFTFNELKLATRNFRPDSVIGEGGFGCVFKGWLDESTLTPTKPGTGLVIAVK
         50         60        70        80        90       100     

     110       120       130       140       150       160         
MDH9.1 KLDHDALQGFREFAAEMDTLGRLNHPNIVRILGYCISGSDRILIYEFLEKSSLDYWLHET
       ::.....:: ::. .:.. ::.:.:::.:...:::.    :.:.:::..:.::.  : . 
gi|279 KLNQEGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEHRLLVYEFMQKGSLENHLFRR
         110       120       130       140       150       160     

     170       180       190       200       210       220         
MDH9.1 DEENSPLTWSTRVNITRDVAKGLAYLHGLPKPIIHRDIKSSNVLLDSDFVAHIADFGLAR
           .:: :  :::.. :.:::::.::. :  .:.::::.::.:::.:. :...::::::
gi|279 GAYFKPLPWFLRVNVALDAAKGLAFLHSDPVKVIYRDIKASNILLDADYNAKLSDFGLAR
         170       180       190       200       210       220     

     230          240       250        260       270       280     
MDH9.1 RIDASR---SHVSTQVAGTMGYMPPEYWE-GNTAATVKADVYSFGVLMLELATRRRPNLT
         :.     :.:::.: ::.::  :::   :.  :  ..::::::::.::. . .:  : 
gi|279 --DGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNA--RSDVYSFGVLLLEILSGKRA-LD
           230       240       250         260       270        280

         290                300       310       320       330      
MDH9.1 VVVDEKEVGLAQWA---------VIMVEQNRCYEMLDFGGVCGSEKGVEEYFRIACLCIK
            :: .:..::         :... .::    ::   .   :..:. .  .:  :..
gi|279 HNRPAKEENLVDWARPYLTSKRKVLLIVDNR----LDTQYL--PEEAVR-MASVAVQCLS
              290       300       310             320        330   

        340       350                                              
MDH9.1 ESTRERPTMVQVVELLEELCRFM                                     
          . :::: :::. :..:                                         
gi|279 FEPKSRPTMDQVVRALQQLQDNLGKPSQTNPVKDTKKLGFKTGTTKSSEKRFTQKPFGRH
           340       350       360       370       380       390   

gi|279 LV
         

Library scan:  0:00:00  total CPU time:  0:00:00