Gene organization of MDH9 (85791 bp)
Chromosome V 14-16 Mb   FTP   Reference   Kazusa Status  
Gene organization of MDH9
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MDH9.1
-
6871..9149 4 0 hypothetical protein
MDH9.2
+
10888..12576 1 0 Contains similarity to beta scruin gb$\|$Z47541 from Limuluspolyphemus. ESTs gb$\|$T04493 and gb$\|$AA585955 come from this gene
MDH9.3
-
15090..16775 1 0 Contains similarity to beta scruin gb$\|$Z47541 from Limuluspolyphemus. ESTs gb$\|$T04493 and gb$\|$AA585955 come from this gene
MDH9.4
-
21543..22097 1 3 F21J9.4
MDH9.5
+
24090..31426 24 0 chloroplast processing enzyme
MDH9.6
-
33254..39453 16 0 similar to trithorax protein in final three exons
MDH9.7
+
43546..43878 1 0 Contains similarity to auxin-induced proteinTM018A10.6 from A. thaliana BAC gb$\|$AF013294
MDH9.8
+
47601..49004 5 0 yeast hypothetical protein YDB1\_SCHPO isolog
MDH9.9
-
50097..51281 1 0 hypothetical protein
MDH9.10
-
52219..53295 1 1 putative protein kinase
MDH9.11
+
56079..57629 1 0 hypothetical protein
MDH9.12
+
58555..59718 1 0 hypothetical protein
MDH9.13
+
61147..63517 13 2 brain and reproductive organ-expressed protein
MDH9.14
+
64077..67111 6 0 hypothetical protein
MDH9.15
-
67394..71404 10 0 kinesin heavy chain isolog
MDH9.16
-
73144..73698 1 1 hypothetical protein


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MDH9.P1
+
55026..55386 2 1 60s ribosomal protein L3


transcribed regions

identifier direction position Definition of the most similar sequence

MDH9.T1
-
1591..2036 Lambda-PRL2 cDNA clone 184M7XP 3'
MDH9.T2
-,+
31441..31781 CD4-16 cDNA clone H8E2T7
Lambda-PRL2 cDNA clone 184A21T7
MDH9.T3
+
81062..81373 clone TAY038, 3' end
MDH9.T4
-
83569..84132 Lambda-PRL2 cDNA clone 163D7T7
Lambda-PRL2 cDNA clone 247P1T7
Lambda-PRL2 cDNA clone 111M12T7
Lambda-PRL2 cDNA clone 162M2T7
Lambda-PRL2 cDNA clone 171H23T7
Lambda-PRL2 cDNA clone 103C7T7
Lambda-PRL2 cDNA clone 201L10T7
Lambda-PRL2 cDNA clone 107A10T7
Lambda-PRL2 cDNA clone 249C22T7
Lambda-PRL2 cDNA clone 144A3T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones (1998) Erika Asamizu, Shusei Sato, Takakazu Kaneko, Yasukazu Nakamura, Hirokazu Kotani, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 379-391
o Kazusa Status