Gene organization of MDC12 (81662 bp)
Chromosome V 24-26 Mb   FTP   Reference   Kazusa Status  
Gene organization of MDC12
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MDC12.1
-
7816..8295 1 0 40s ribosomal protein S15
MDC12.2
+
13490..14548 2 0 calmodulin
MDC12.3
-
23072..24058 1 0 chromosome 4, ESSA I contig fragment No. 2
MDC12.4
-
24472..26862 6 2 transcriptional regulator RPD3 homolog
MDC12.5
-
27605..30706 10 0 Human DEAD-box protein p72
MDC12.6
+
36872..38248 3 0 probable membrane protein YLR361c
MDC12.7
-
42123..44034 5 3 hypothetical 46.7 kD protein c50c3.8 in chromosome III
MDC12.8
-
49744..51682 4 0 pectate lyase
MDC12.9
+
54780..57195 3 5 Mouse Topoisomerase-inhibitor suppressed
MDC12.10
-
64989..68074 3 0 glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)
MDC12.11
+
70535..73085 4 1 MEX-1
MDC12.12
-
77987..79529 2 0 hypothetical protein


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MDC12.P1
-
47337..48656 5 0 maternal-effect lethal 26
MDC12.P2
-
68907..69197 1 0 glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)
MDC12.P3
-
80760..81544 4 0 nucleoside diphosphate kinase II precursor (EC 2.7.4.6)


transcribed regions

identifier direction position Definition of the most similar sequence

MDC12.T1
+
1908..2254 clone RaR063; 5' end
MDC12.T2
+
54228..54457 clone 32B10T7
MDC12.T3
+
59649..59846 clone 125L24T7
MDC12.T4
-
63159..63642 clone F10E3T7
MDC12.T5
+
76083..76176 clone 208L8T7


potential RNA genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MDC12.R1
+
38671..38742 1 0 tRNA-Thr(UGU)


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. III. Sequence Features of the Regions of 1,191,918 bp Covered by Seventeen Physically assigned P1 Clones. (1997) Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Hirokazu Kotani, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 4, 401-414
o Kazusa Status