SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MDA7.9 (Universal genetic code) : 127 aa
 vs  library
 searching mmnttp1gn library

    663 residues in     1 sequences
The best scores are:                              s-w
MMNTTP1GN, 663 bases, 7FC checksum.                (663) 166

>>MMNTTP1GN, 663 bases, 7FC checksum.                (663 aa)
Smith-Waterman score: 166;   57.143% identity in 49 aa overlap

MMNTTP MAGDRLPRKVMDAKKLASLLRGGPGGPLVIDSRSFVEYNSCHVLSSVNICCSKLVKRRLQ
               10        20        30        40        50        60

MMNTTP QGKVTIAELIQPATRSQVDATEPQDVVVYDQSTRDASVLAADSFLSILLSKLDGCFDSVA
               70        80        90       100       110       120

MMNTTP ILTGGFATFSSCFPGLCEGKPATLPSMSLSQPCLPVPSVGLTRILPHLYLGSQKDVLNKD
              130       140       150       160       170       180

MMNTTP LMTQNGISYVLNASNSCPKPDFICESRFMRIPINDNYCEKLLPWLDKSIEFIDKAKLSSC
              190       200       210       220       230       240

MMNTTP QVIVHCLAGISRSATIAIAYIMKTMGMSSDDAYRFVKDRRPSISPNFNFLGQLLEYERSL
              250       260       270       280       290       300

MMNTTP KLLAALQTDGPHLGTPEPLMGPAAGIPLPRLPPSTSESAATGSEAATAAREGSPSAGGDA
              310       320       330       340       350       360

MMNTTP PIPSTAPATSALQQGLRGLHLSSDRLQDTNRLKRSFSLDIKSAYAPSRRPDFPGPPDPGE
              370       380       390       400       410       420

MMNTTP APKLCKLDSPSGGTLGLPSPSPDSPDSVPECRPRPRRRRPPASSPARSPAHGLGLNFGDT
              430       440       450       460       470       480

MMNTTP ARQTPRHGLSALSAPGLPGPGQPAGPGGWVPPLDSPGTPSPDGPWCFSPEGAQGPGAVFS
              490       500       510       520       530       540

                          10        20        30        40         
MDA7.9            MMMMSSLGGGGGGGGGSGGGIGGGGGGRFMTYSSSLSVPPSAPQSPNYS
                      :: :::::::::.::: :::::.   . ::: :   :. .: . :
MMNTTP AFGRVSAGAPGPGNSSSSGGGGGGGGGGGGG-GGGGGSSSSNSSSSSSSSSSSSSSSSSS
              550       560       570        580       590         

      50        60        70        80        90       100         
MDA7.9 GGLRSQSSVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQGEHYCFCCLLFVFSSHI
       . ::                                                        
MMNTTP SDLRRRDVRTGWPEEPAADAQFKRRSCQMEFEEGMVEGRARGEELAALGKQTSFSGSVEV
     600       610       620       630       640       650         

     110       120       
MDA7.9 ILHSLLQIHEAIIQLINS
                         
MMNTTP IEVS              
     660                 

Library scan:  0:00:00  total CPU time:  0:00:00