SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MDA7.13 (Universal genetic code) : 340 aa
 vs  library
 searching slu60478 library

    336 residues in     1 sequences
The best scores are:                              s-w
SLU60478, 336 bases, AEF checksum.                 (336) 428

>>SLU60478, 336 bases, AEF checksum.                 (336 aa)
Smith-Waterman score: 428;   30.548% identity in 347 aa overlap

                                                      10        20 
MDA7.1                                        MRLLLDVLLLFCLIDRQEFGN
                                                    .: :   : :.  : 
SLU604 AGFAGDDAPRAVFPSIVGRPRYTGVMVGMGQKDAYVGDEAQSKRGILTLKYPI-RH--GI
               10        20        30        40        50          

              30        40        50               60        70    
MDA7.1 IESPIYARLQQFFATIFTRFDAGKALYAANSD----TESA---KASRRQLKTAIFNVLFD
       ...  .  .....   :  ..  ..  : ..:    ::.    ::.:...   .:.. : 
SLU604 VDN--WDDMEKIWHHTF--YNELRV--APEDDSILLTEAPLNPKANREKMTQIMFET-F-
        60          70            80        90       100           

           80         90       100       110       120       130   
MDA7.1 MNVPAV-CAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALK
        ::::.  :. ::::.:::. ::.:::.. :  :   .:: .: .. .. .  . ...  
SLU604 -NVPAMYIAI-QAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA-ILRLDLAGRD
      110        120       130       140       150        160      

           140       150          160       170            180     
MDA7.1 LTGFLKEKMQENNISFQSLYT---VRTLKEKLCYVALDYKAEL-----SKDTQASVEVSG
       :: .:   . : . :: .      :: .:::: ::::::. ::     .::.. : :.  
SLU604 LTDYLMMILTERGYSFTTAAEREIVRDVKEKLAYVALDYEQELETTKNGKDAEKSYELP-
        170       180       190       200       210       220      

          190       200       210        220       230       240   
MDA7.1 EGWF-TLSKERFQTGEILFQPRLAGMRAMSLHQAV-SLCMDHCDAAGLTGDDSWFKTVVL
       .: . :.. :::.  :.:::: : ::.:...:... :  : .::.  .  :   . .:::
SLU604 DGQIVTIGAERFRCPEVLFQPSLIGMEAVGIHETTYSSIM-KCDV-DIRRD--LYGNVVL
         230       240       250       260         270         280 

           250       260       270       280       290       300   
MDA7.1 TGGSACLPGLSGSITISVFLLQMPSIYSEIREWRAYGFCFILCDLYPERLERELQDHLPS
       .:::. .::    ::                            :    :. .:.    ::
SLU604 SGGSTMFPG----IT----------------------------D----RMSKEFTALAPS
             290                                           300     

           310          320       330       340
MDA7.1 SISNGIRVIPPP---YGVDTSWHGAKLISNVSDIIFHSYS
       :..  :.:. ::   :.:   : :.......:        
SLU604 SMK--IKVVAPPESKYSV---WIGGSILASLSTFQQ    
           310       320          330          

Library scan:  0:00:00  total CPU time:  0:00:00