SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MDA7.11 (Universal genetic code) : 148 aa
 vs  library
 searching peaubc4 library

    148 residues in     1 sequences
The best scores are:                              s-w
PEAUBC4, 148 bases, 2162 checksum.                 (148) 948

>>PEAUBC4, 148 bases, 2162 checksum.                 (148 aa)
Smith-Waterman score: 948;   89.189% identity in 148 aa overlap

               10        20        30        40        50        60
MDA7.1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDY
       :::::: :::.:::.:::.::::::...:::.:::::.::::::.:::::::::::::::
PEAUBC MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIVGPADSPYAGGVFLVTIHFPPDY
               10        20        30        40        50        60

               70        80        90       100       110       120
MDA7.1 PFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLV
       :::::::::::::.::::::::::::::::::::::::.:::::::::::::::::::::
PEAUBC PFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLV
               70        80        90       100       110       120

              130       140        
MDA7.1 PEIAHIYKTDRVKYESTAQSWTQKYAMG
       :::::.:::::.:::.::.:::::::::
PEAUBC PEIAHMYKTDRTKYEATARSWTQKYAMG
              130       140        

Library scan:  0:00:00  total CPU time:  0:00:00