Gene organization of MCO15 (82918 bp)
Chromosome V 20-22 Mb   FTP   Reference   Kazusa Status  
Gene organization of MCO15
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MCO15.1
+
6741..9123 11 1 dihydrolipoamide succinyltransferase gene
MCO15.2
-
10419..11775 5 0 GTP-binding nuclear protein ran-b1
MCO15.3
-
15572..16915 1 0 STE11 protein kinase homolog NPK1
MCO15.4
-
20121..23584 5 2 Human homolog of Drosophila splicing regulator suppressor-of-white-apricot
MCO15.5
+
26587..27075 1 0 STIG1 protein
MCO15.6
-
32094..34745 10 2 hypothetical 49.4 kD protein in cdc12-orc6 intergenic region
MCO15.7
+
40087..40317 1 1 50s ribosomal protein L30
MCO15.8
-
42467..43489 3 2 SMT3 protein
MCO15.9
-
44188..44788 3 0 SMT3 protein
MCO15.10
+
47671..49047 1 0 glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)
MCO15.11
+
51002..52671 8 10 small Ras-like GTP-binding protein
MCO15.12
+
53422..55049 6 4 AR192
MCO15.13
-
55427..56091 3 4 BCL7B protein
MCO15.14
+
56394..59330 11 1 hypothetical protein
MCO15.15
+
61433..63896 7 4 giantin
MCO15.16
+
64680..65872 6 0 Ca+2-binding EF hand protein
MCO15.17
+
75525..77335 8 0 serine/threonine protein phosphatase pp-X isozyme 1 (EC 3.1.3.16)
MCO15.18
+
77935..79017 1 0 chromosome 4, ESSA I contig fragment No. 5
MCO15.19
-
79460..81244 6 2 cpFtsZ mRNA, nuclear gene encoding chloroplast protein


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MCO15.P1
+
3070..3994 4 0 Human KIAA0066 gene


transcribed regions

identifier direction position Definition of the most similar sequence

MCO15.T1
+
27950..28183 clone G2D8T7
MCO15.T2
+
30192..30395 clone 215N20T7
MCO15.T3
-
40448..40744 clone TAP0327; 3' end
MCO15.T4
-
81462..81822 Lambda-PRL2 cDNA clone 248N24T7
Lambda-PRL2 cDNA clone 202J14T7
Lambda-PRL2 cDNA clone 251B22T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. IV. Sequence Features of the Regions of 1,456,315 bp Covered by Nineteen Physically assigned P1 and TAC Clones (1998) Shusei Sato, Takakazu Kaneko, Hirokazu Kotani, Yasukazu Nakamura, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 41-54
o Kazusa Status