SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MCM23.P2 (Universal genetic code) : 41 aa
 vs  library
 searching ae00068013 library

    161 residues in     1 sequences
The best scores are:                              s-w
AE00068013, 161 bases, E0C checksum.               (161)  62

>>AE00068013, 161 bases, E0C checksum.               (161 aa)
Smith-Waterman score: 62;   35.294% identity in 34 aa overlap

                                                    10        20   
MCM23.                                      KKSYKCFKYLQFFFLKVKKCL--
                                                   ..:..:.:  . ::  
AE0006 MKVLIVFYKDLEKNKEEILNLMKKNYKLIKRKLGIDNIYASITEEFLEIFYLFPEICLIN
               10        20        30        40        50        60

                30        40                                       
MCM23. --RLYKSFKRIYKGLKSLVNHS                                      
         :   .:  .::::..:                                          
AE0006 NTRGTLNFG-LYKGLRKLKGDDILVVDAGKSFSEGKFEKVPMGDLPSILMDKEKWAGLAY
                70        80        90       100       110         

AE0006 IPMREMYYFIRSLEENFDKCITEAFETLKKSYGINFVKSFIS
     120       130       140       150       160 

Library scan:  0:00:00  total CPU time:  0:00:00