SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MCI2.P1 (Universal genetic code) : 225 aa
 vs  library
 searching gi:3063445 library

   1029 residues in     1 sequences
The best scores are:                              s-w
gi|3063445                                         (1029) 776

>>gi|3063445                                         (1029 aa)
Smith-Waterman score: 776;   52.607% identity in 211 aa overlap

gi|306 MAIPRLFFLFYYIGFALFPFVSSETFQNSEQEILLAFKSDLFDPSNNLQDWKRPENATTF
               10        20        30        40        50        60

gi|306 SELVHCHWTGVHCDANGYVAKLLLSNMNLSGNVSDQIQSFPSLQALDLSNNAFESSLPKS
               70        80        90       100       110       120

gi|306 LSNLTSLKVIDVSVNSFFGTFPYGLGMATGLTHVNASSNNFSGFLPEDLGNATTLEVLDF
              130       140       150       160       170       180

gi|306 RGGYFEGSVPSSFKNLKNLKFLGLSGNNFGGKVPKVIGELSSLETIILGYNGFMGEIPEE
              190       200       210       220       230       240

gi|306 FGKLTRLQYLDLAVGNLTGQIPSSLGQLKQLTTVYLYQNRLTGKLPRELGGMTSLVFLDL
              250       260       270       280       290       300

gi|306 SDNQITGEIPMEVGELKNLQLLNLMRNQLTGIIPSKIAELPNLEVLELWQNSLMGSLPVH
              310       320       330       340       350       360

gi|306 LGKNSPLKWLDVSSNKLSGDIPSGLCYSRNLTKLILFNNSFSGQIPEEIFSCPTLVRVRI
              370       380       390       400       410       420

gi|306 QKNHISGSIPAGSGDLPMLQHLELAKNNLTGKIPDDIALSTSLSFIDISFNHLSSLSSSI
              430       440       450       460       470       480

gi|306 FSSPNLQTFIASHNNFAGKIPNQIQDRPSLSVLDLSFNHFSGGIPERIASFEKLVSLNLK
              490       500       510       520       530       540

gi|306 SNQLVGEIPKALAGMHMLAVLDLSNNSLTGNIPADLGASPTLEMLNVSFNKLDGPIPSNM
              550       560       570       580       590       600

gi|306 LFAAIDPKDLVGNNGLCGGVLPPCSKSLALSAKGRNPGRIHVNHAVFGFIVGTSVIVAMG
              610       620       630       640       650       660

gi|306 MMFLAGRWIYTRWDLYSNFAREYIFCKKPREEWPWRLVAFQRLCFTAGDILSHIKESNII
              670       680       690       700       710       720

gi|306 GMGAIGIVYKAEVMRRPLLTVAVKKLWRSPSPQNDIEDHHQEEDEEDDILREVNLLGGLR
              730       740       750       760       770       780

                                                     10        20  
MCI2.P                                       MTAAAEWTALYQIAIGVAQGIC
                                                  .: . :..:.::.::. 
gi|306 HRNIVKILGYVHNEREVMMVYEYMPNGNLGTALHSKDEKFLLRDWLSRYNVAVGVVQGLN
              790       800       810       820       830       840

             30        40        50        60         70        80 
MCI2.P YLHHDCDPVIVHRDLKPSNILLDADFEARVADFGVAKLI-QTDESMSVVAGSYGYIAPEY
       :::.:: : :.:::.: .:::::...:::.::::.::.. . .:..:.::::::::::::
gi|306 YLHNDCYPPIIHRDIKSNNILLDSNLEARIADFGLAKMMLHKNETVSMVAGSYGYIAPEY
              850       860       870       880       890       900

              90       100       110       120       130       140 
MCI2.P AYTLQVDKKSDIYSYGVILLEIITGKRSVEPEFGEGNSIVDWVRSKLKTKEDVEEVLDKS
       .:::..:.:::::: ::.:::..:::  ..: : .. ..:.:.: :.: .:..:::.: :
gi|306 GYTLKIDEKSDIYSLGVVLLELVTGKMPIDPSFEDSIDVVEWIRRKVKKNESLEEVIDAS
              910       920       930       940       950       960

             150       160       170       180       190       200 
MCI2.P MGRSCSLIREEMKQMLRIALLCTSRSPTDRPPMRDVLLILQEAKPKRKTVGDNVIVVGDV
       .. .:. . :::   ::::::::.. : ::: .:::. .: ::::.::.: .   :.::.
gi|306 IAGDCKHVIEEMLLALRIALLCTAKLPKDRPSIRDVITMLAEAKPRRKSVCQ---VAGDL
              970       980       990      1000      1010          

             210       220     
MCI2.P NDVNFEDVCSVDVGHDVKCQRIGV
         . :..   : ::          
gi|306 -PI-FRN-SPV-VGLI        
        1020                   

Library scan:  0:00:00  total CPU time:  0:00:00