Gene organization of MCD7 (87685 bp)
Chromosome V 20-22 Mb   FTP   Reference   Kazusa Status  
Gene organization of MCD7
figure legend

potential protein genes
identifier direction position No. of
exon		 No. of
EST		 Definition of the most similar sequence
MCD7.1
+
497..5741 13 0 PEX5 protein
MCD7.2
+
15552..17030 1 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.3
+
21973..23022 3 0 expansin At-EXP1
MCD7.4
+
24833..26309 4 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.5
+
26887..29278 7 0 dioscorin class B
MCD7.6
+
31373..32560 1 2 Rat neurodap1 gene
MCD7.7
-
33376..35648 3 2 pyruvate kinase
MCD7.8
-
36708..41069 16 2 alpha glucosidase II beta subunit
MCD7.9
+
43892..46360 5 0 chromosome II BAC T06B20 genomic sequence
MCD7.10
-
49322..50738 3 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.11
-
51958..53391 3 1 BAC IG005I10
MCD7.12
-
55912..57392 3 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.13
-
59191..60734 3 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.14
-
61984..63450 3 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.15
-
63985..65453 3 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.16
-
66445..67694 2 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.17
-
68864..70236 2 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.18
-
71894..72883 1 0 cosmid T27E9
MCD7.19
-
73605..75027 2 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.20
+
78628..80982 6 0 protein kinase apk1a (EC 2.7.1.-)
MCD7.21
+
82179..83074 2 0 l-gulonolactone oxidase (EC 1.1.3.8)
MCD7.22
-
83448..83936 2 0 5B protein
MCD7.23
+
84719..86536 2 0 l-gulonolactone oxidase (EC 1.1.3.8)

potential exons
identifier direction position No. of
exon		 No. of
EST		 Definition of the most similar sequence
MCD7.P1
-
58641..58808 1 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.P2
-
61699..61821 1 0 chromosome 4, ESSA I contig fragment No. 2
MCD7.P3
+
87177..87581 2 0 chaperonin-60 beta subunit mRNA, nuclear gene encoding chloroplast protein

potential RNA genes
identifier direction position No. of
exon		 No. of
EST		 Definition of the most similar sequence
MCD7.R1
+
41250..41323 1 0 tRNA-Ile(AAT)

Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. IV. Sequence Features of the Regions of 1,456,315 bp Covered by Nineteen Physically assigned P1 and TAC Clones (1998) Shusei Sato, Takakazu Kaneko, Hirokazu Kotani, Yasukazu Nakamura, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 41-54
o Kazusa Status