SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MCA23.P2 (Universal genetic code) : 36 aa
 vs  library
 searching gnl:PID:e1283948 library

   1248 residues in     1 sequences
The best scores are:                              s-w
gnl|PID|e1283948                                   (1248) 198

>>gnl|PID|e1283948                                   (1248 aa)
Smith-Waterman score: 198;   86.111% identity in 36 aa overlap

gnl|PI MHARQRNVGNGYRSGSIGMGMSGSRISPERPMRGHGFYGSEHQHRGFNRGYGRGRGRSKS
               10        20        30        40        50        60

gnl|PI YHNQLPPPLPPPPVQRRSSGGDVFMEAGRLATEYLVSQGVLPQTVLSSKWQNGNFRKQAG
               70        80        90       100       110       120

gnl|PI EFQSSRSQEEARMDVSAPAAEKRRYIDGYSSAGSRNSLKGRRSHRYDSDFGRSGSWSERS
              130       140       150       160       170       180

gnl|PI KAFETETGDDSVSGHQEEQPLAEDIASSVQRSASGEFMRKCEGAGDSESVLDKYNLQDEA
              190       200       210       220       230       240

gnl|PI QSKTGSSSAGKDIVQDCEISKVSEGSSSLSAGSGEMKGRSGGNGGEDENQTAIEDGSIHQ
              250       260       270       280       290       300

gnl|PI RCEDASIDQQCGADESFTKSGIDLATLCKFEKVPTRTRSSLTAKGPKLYLSHNIKDTSHN
              310       320       330       340       350       360

gnl|PI SGLEEEDQTENRCETRGQSSGKADSTGDENDQVEDFALVQYIENSKCHRSNSFPSSILRD
              370       380       390       400       410       420

gnl|PI NSEKESGLELPNLHRSHSVGKVGEKRPGEGSDLEEGSKRQRDWVAVSEANERFNMFKTSG
              430       440       450       460       470       480

gnl|PI NQCDPEEEGKTSSFNKRLIDGAAGKRVSHESLVNNSTYNRTHTGRTGPGYAEEHQLFPAS
              490       500       510       520       530       540

gnl|PI FKMCDLNLGGASDVNDGIKESRQAVDFDLSISSSSKSLEFGTSTRMSNGKEIEVINLDDD
              550       560       570       580       590       600

gnl|PI QEVVKSSNDPGRKQEAAPYMGIDDVPDYNERLMMVEYLDSFTPINQGTSSVPQNNNTVSL
              610       620       630       640       650       660

gnl|PI QDREILKTSQGAIGNDQVPNNTDDDSIFMSLGEIPLNFFVESMDLESESSALESVDDNVL
              670       680       690       700       710       720

gnl|PI IQQSASNVCDDGRSLDNGSCSDESVKLLSTSNSVELGKPMSFDSPGDGGGAYSPVLKGQG
              730       740       750       760       770       780

gnl|PI LRKWRRIRRDLVKDTSANMENSKALKRGLSGVAHSHGKQMQFQSPEVEQESQGSVGSVNM
              790       800       810       820       830       840

gnl|PI LKSSGDGFDILGSSGYDSRFVAGVGFSAGMDLEIDDDRSSKSSTVARAPKVIRYEKPMIS
              850       860       870       880       890       900

gnl|PI SGQGGNIRVENSKKHRGESVDFEKENSYSSLESDSRKQSGRMMDYNGENGETSMRKDDAG
              910       920       930       940       950       960

               10        20        30                              
MCA23. GEGGESINTTNRYSEELDSLTEAIDGFLALQDALEK                        
       ::::::::: ::::.:.: :::::.:::::::::::                        
gnl|PI GEGGESINTDNRYSDEMDPLTEAINGFLALQDALEKEVQQFQEIGNEPMPQHHEQVSEAN
              970       980       990      1000      1010      1020

gnl|PI SPHPEIVTLVNNVEQLENMLEETRSMLEVKESHIRDLESTTNQSKHSWGGTEIVVEDIFR
             1030      1040      1050      1060      1070      1080

gnl|PI QKIEAEIEYLIYSRSIDNLNSQMKLIDEQESLAEEQTHETLNKLGRVQTKAANFTNRAQD
             1090      1100      1110      1120      1130      1140

gnl|PI LQNDCIEITGTIKKRAFNTNKAKTAVAAEINSEIKRGVESAVEAFRKRRPIRNKLKMEGG
             1150      1160      1170      1180      1190      1200

gnl|PI EGRQQKDIPDMELEEERDTNSAIRKKNNNISSMKLLLKKLVTFSKKNT
             1210      1220      1230      1240        

Library scan:  0:00:00  total CPU time:  0:00:00