SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MCA23.P1 (Universal genetic code) : 55 aa
 vs  library
 searching sp:Q09152:FPPS_ARATH library

    360 residues in     1 sequences
The best scores are:                              s-w
sp|Q09152|FPPS_ARATH                               (360) 346

>>sp|Q09152|FPPS_ARATH                               (360 aa)
Smith-Waterman score: 346;   94.231% identity in 52 aa overlap

sp|Q09 LTRANSTRANSFERASEMETDLKSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYN
               10        20        30        40        50        60

                                                                   
MCA23.                                                     IQFNSVTR
                                                              :::::
sp|Q09 VRGGKLNRGLSVVDSFKLLKQGNDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTR
               70        80        90       100       110       120

       10        20        30        40        50                  
MCA23. RVQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFREKPYYLDLVDL             
       : ::::::::::::::::::::::::::::::::::.::::.:::::             
sp|Q09 RGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQM
              130       140       150       160       170       180

sp|Q09 IDLITTFEGEKDLSKYSLSIHRRIVQHKTAYYSFYLPVACALLMAGENLENHIDVKNVLV
              190       200       210       220       230       240

sp|Q09 DMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKT
              250       260       270       280       290       300

sp|Q09 DPSNVAKVKDLYKELDLEGVFMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKRQK
              310       320       330       340       350       360

Library scan:  0:00:00  total CPU time:  0:00:00