SSEARCH searches a sequence database using the Smith-Waterman algorithm version 2.0u54, July. 1996 Please cite: T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; W.R. Pearson (1991) Genomics 11:635-650 >MCA23.17 (Universal genetic code) : 919 aa vs library searching gi:3242789 library 921 residues in 1 sequences The best scores are: s-w gi|3242789 (921)6131 >>gi|3242789 (921 aa) Smith-Waterman score: 6131; 99.891% identity in 919 aa overlap 10 20 30 40 50 MCA23. MRRGNSSNDHELGILRGANSDTNSDTESIASDRGAFSGPLGRPKRASKKNARFADDLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 MKMRRGNSSNDHELGILRGANSDTNSDTESIASDRGAFSGPLGRPKRASKKNARFADDLP 10 20 30 40 50 60 60 70 80 90 100 110 MCA23. KRSNSVAGGRGDDDEYVEITLDIRDDSVAVHSVQQAAGGGGHLEDPELALLTKKTLESSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 KRSNSVAGGRGDDDEYVEITLDIRDDSVAVHSVQQAAGGGGHLEDPELALLTKKTLESSL 70 80 90 100 110 120 120 130 140 150 160 170 MCA23. NNTTSLSFFRSTSSRIKNASRELRRVFSRRPSPAVRRFDRTSSAAIHALKGLKFIATKTA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 NNTTSLSFFRSTSSRIKNASRELRRVFSRRPSPAVRRFDRTSSAAIHALKGLKFIATKTA 130 140 150 160 170 180 180 190 200 210 220 230 MCA23. AWPAVDQRFDKLSADSNGLLLSAKFWECLGMNKESKDFADQLFRALARRNNVSGDAITKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 AWPAVDQRFDKLSADSNGLLLSAKFWECLGMNKESKDFADQLFRALARRNNVSGDAITKE 190 200 210 220 230 240 240 250 260 270 280 290 MCA23. QLRIFWEQISDESFDAKLQVFFDMVDKDEDGRVTEEEVAEIISLSASANKLSNIQKQAKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 QLRIFWEQISDESFDAKLQVFFDMVDKDEDGRVTEEEVAEIISLSASANKLSNIQKQAKE 250 260 270 280 290 300 300 310 320 330 340 350 MCA23. YAALIMEELDPDNAGFIMIENLEMLLLQAPNQSVRMGDSRILSQMLSQKLRPAKESNPLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. gi|324 YAALIMEELDPDNAGFIMIENLEMLLLQAPNQSVRMGDSRILSQMLSQKLRPAKESNPLL 310 320 330 340 350 360 360 370 380 390 400 410 MCA23. RWSEKIKYFILDNWQRLWIMMLWLGICGGLFTYKFIQYKNKAAYGVMGYCVCVAKGGAET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 RWSEKIKYFILDNWQRLWIMMLWLGICGGLFTYKFIQYKNKAAYGVMGYCVCVAKGGAET 370 380 390 400 410 420 420 430 440 450 460 470 MCA23. LKFNMALILLPVCRNTITWLRNKTKLGTVVPFDDSLNFHKVIASGIVVGVLLHAGAHLTC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 LKFNMALILLPVCRNTITWLRNKTKLGTVVPFDDSLNFHKVIASGIVVGVLLHAGAHLTC 430 440 450 460 470 480 480 490 500 510 520 530 MCA23. DFPRLIAADEDTYEPMEKYFGDQPTSYWWFVKGVEGWTGIVMVVLMAIAFTLATPWFRRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 DFPRLIAADEDTYEPMEKYFGDQPTSYWWFVKGVEGWTGIVMVVLMAIAFTLATPWFRRN 490 500 510 520 530 540 540 550 560 570 580 590 MCA23. KLNLPNFLKKLTGFNAFWYTHHLFIIVYALLIVHGIKLYLTKIWYQKTTWMYLAVPILLY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 KLNLPNFLKKLTGFNAFWYTHHLFIIVYALLIVHGIKLYLTKIWYQKTTWMYLAVPILLY 550 560 570 580 590 600 600 610 620 630 640 650 MCA23. ASERLLRAFRSSIKPVKMIKVAVYPGNVLSLHMTKPQGFKYKSGQFMLVNCRAVSPFEWH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 ASERLLRAFRSSIKPVKMIKVAVYPGNVLSLHMTKPQGFKYKSGQFMLVNCRAVSPFEWH 610 620 630 640 650 660 660 670 680 690 700 710 MCA23. PFSITSAPGDDYLSVHIRTLGDWTRKLRTVFSEVCKPPTAGKSGLLRADGGDGNLPFPKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 PFSITSAPGDDYLSVHIRTLGDWTRKLRTVFSEVCKPPTAGKSGLLRADGGDGNLPFPKV 670 680 690 700 710 720 720 730 740 750 760 770 MCA23. LIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISILKDIINNMKGPDRDSDIENNNSNNNS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 LIDGPYGAPAQDYKKYDVVLLVGLGIGATPMISILKDIINNMKGPDRDSDIENNNSNNNS 730 740 750 760 770 780 780 790 800 810 820 830 MCA23. KGFKTRKAYFYWVTREQGSFEWFKGIMDEISELDEEGIIELHNYCTSVYEEGDARVALIA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 KGFKTRKAYFYWVTREQGSFEWFKGIMDEISELDEEGIIELHNYCTSVYEEGDARVALIA 790 800 810 820 830 840 840 850 860 870 880 890 MCA23. MLQSLQHAKNGVDVVSGTRVKSHFAKPNWRQVYKKIAVQHPGKRIGVFYCGMPGMIKELK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|324 MLQSLQHAKNGVDVVSGTRVKSHFAKPNWRQVYKKIAVQHPGKRIGVFYCGMPGMIKELK 850 860 870 880 890 900 900 910 MCA23. NLALDFSRKTTTKFDFHKENF ::::::::::::::::::::: gi|324 NLALDFSRKTTTKFDFHKENF 910 920 Library scan: 0:00:00 total CPU time: 0:00:01