SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MCA23.16 (Universal genetic code) : 436 aa
 vs  library
 searching gi:1155261 library

    436 residues in     1 sequences
The best scores are:                              s-w
gi|1155261                                         (436)2812

>>gi|1155261                                         (436 aa)
Smith-Waterman score: 2812;   99.771% identity in 436 aa overlap

               10        20        30        40        50        60
MCA23. MGDKNDDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|115 MGDKNDDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
               10        20        30        40        50        60

               70        80        90       100       110       120
MCA23. IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNEDGKEKKVTIDFEPFRPIN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|115 IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNEDGKEKKVTIDFEPFRPIN
               70        80        90       100       110       120

              130       140       150       160       170       180
MCA23. ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
       .:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|115 GSLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
              130       140       150       160       170       180

              190       200       210       220       230       240
MCA23. RGGQSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|115 RGGQSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQS
              190       200       210       220       230       240

              250       260       270       280       290       300
MCA23. DMFDPRLAAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|115 DMFDPRLAAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG
              250       260       270       280       290       300

              310       320       330       340       350       360
MCA23. KYVFGVEDTLNALESGAIETLIVWENLDINRYVMKNSATGETVIKHLNKEQEANTENFKV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|115 KYVFGVEDTLNALESGAIETLIVWENLDINRYVMKNSATGETVIKHLNKEQEANTENFKV
              310       320       330       340       350       360

              370       380       390       400       410       420
MCA23. ADSDLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|115 ADSDLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
              370       380       390       400       410       420

              430      
MCA23. TAFDSEDGEALDDDSE
       ::::::::::::::::
gi|115 TAFDSEDGEALDDDSE
              430      

Library scan:  0:00:00  total CPU time:  0:00:00