SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MCA23.13 (Universal genetic code) : 264 aa
 vs  library
 searching sp:P43188:KADC_MAIZE library

    231 residues in     1 sequences
The best scores are:                              s-w
sp|P43188|KADC_MAIZE                               (231) 795

>>sp|P43188|KADC_MAIZE                               (231 aa)
Smith-Waterman score: 795;   56.170% identity in 235 aa overlap

               10        20        30        40        50        60
MCA23. MTGCVNSISPPPVTLYRHRASPSRSSFSLSGDALHSLYRHRRVSRSPSIIAPKFQIVAAE
                                                         .:. . .:.:
sp|P43                                                   SPH-RYLASE
                                                                   

                70        80        90       100       110         
MCA23. K-SEPLKIMISGAPASGKGTQCELITHKYGLVHISAGDLLRAEIASGSENGRRAKEHMEK
         ..:::.:::::::::::::::::  :: :.:::::::::::::.:::::.:::: :::
sp|P43 ALADPLKVMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEK
      10        20        30        40        50        60         

     120       130       140       150       160       170         
MCA23. GQLVPDEIVVMMVKDRLSQTDSEQKGWLLDGYPRSASQATALKGFGFQPDLFIVLEIA-E
       :::::::::: :::.:: : :....:::::::::: ::: ::. . ..:: ::.:..  :
sp|P43 GQLVPDEIVVNMVKERLRQPDAQENGWLLDGYPRSYSQAMALETLEIRPDTFILLDVPDE
      70        80        90       100       110       120         

      180       190        200       210       220                 
MCA23. MFNSGKSVLKSGQLIIKL-GKIYHLKYSPPETEEIAVRLTQRFDDTEEK-----------
       ..   . :.  :. .  . ::::::::::::.:::: ::::::::::::           
sp|P43 LLV--ERVV--GRRLDPVTGKIYHLKYSPPENEEIASRLTQRFDDTEEKVKLRLETYYQN
     130           140       150       160       170       180     

                  230       240       250       260    
MCA23. ----------IIIQIEGNRSKEEVFAQIDSSLSELLQERNTAPSSLLS
                 ::....:. . . :::.::  :. .:...:   ::   
sp|P43 IESLLSTYENIIVKVQGDATVDAVFAKIDELLGSILEKKNEMVSST  
         190       200       210       220       230   

Library scan:  0:00:00  total CPU time:  0:00:00