SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >MCA23.10 (Universal genetic code) : 444 aa
 vs  library
 searching gi:2688657 library

    448 residues in     1 sequences
The best scores are:                              s-w
gi|2688657                                         (448)1207

>>gi|2688657                                         (448 aa)
Smith-Waterman score: 1207;   44.018% identity in 443 aa overlap

                   10        20        30          40           50 
MCA23.     MAAETSIRKLPSLSGLRHRRNPLEDNPYFHPSNG--FYITPSDVILAQVAY---DH
                   :. :: :  .. ::: :   :. :.:   ... .. :  .: :   :.
gi|268 MVYRIKNENLDFKIDSL-GECKQNNPLID---FYASEGSSHFVNEKNKIKFSV-YRNEDK
               10         20           30        40         50     

              60        70        80        90       100       110 
MCA23. SAHSQSRVAYHRAGPRREIMYEPSAVKAAIVTCGGLCPGMNTVIRELVVGLWELYGVREI
       . . .. :  ..::::..:.. :  :::::.::::::::.: ::: .:  ::..::::.:
gi|268 GDRYED-VLLEKAGPREKIYFVPRHVKAAITTCGGLCPGFNDVIRSIVRTLWKIYGVRNI
          60         70        80        90       100       110    

             120          130       140       150       160        
MCA23. YGIPAGYRGFY--SMKA-VKLDPKAVHDWHKKGGTVLATSRGGFHLQKIVDAIH-LNGYN
       ::.  ::.:.   : .  ..:.: .: : .: :::.:..::::..  .:::... .:  :
gi|268 YGVKFGYQGLLPESNSPFINLNPDVVDDINKFGGTILGSSRGGIKPVEIVDTLERMN-IN
          120       130       140       150       160       170    

       170       180       190       200       210       220       
MCA23. QVYIIGGDGTMRGAVEIFKEISLRKLEVGITVIPKTVDNDVGIIDRSFGFQTAVEMAQEA
       ... ::::::..:.. : .::  :.:..... ::::::::  ....::::.::::.:  :
gi|268 MIFNIGGDGTQKGSLLIAEEIEKRNLKIAVVGIPKTVDNDFMFVQKSFGFETAVEQAVAA
           180       190       200       210       220       230   

       230       240       250       260       270       280       
MCA23. ISAAHVEAESAVNGIGLVKLMGRSTGHIALHATLSSRDVDCCLIPEMDFYLEGKGGLFEF
       ...:: ::.:: :::::::.:::..: :: :..::: ::. :::::.:: .:: .:..  
gi|268 VAGAHFEANSAYNGIGLVKVMGRDSGFIAAHTALSSNDVNFCLIPELDFDIEGPNGFLVH
           240       250       260       270       280       290   

       290             300       310       320       330       340 
MCA23. LEKRL--KER----GHAVLVVAEGAGQEMIPRNESQKQERDESGNAVFLDVGVWFKSVLK
       ::.::  ::      :::...::::::...  ..  :. .:.::: .. :.:...:. . 
gi|268 LERRLLEKESLEEIPHAVILIAEGAGQKYF--DHFPKK-KDDSGNLLYEDIGLYIKDKIT
           300       310       320          330       340       350

             350       360       370       380       390       400 
MCA23. AWWEREHPDELFTVKYIDPTYMIRAVPANATDNLYCTLLAHSAIHGVMAGYTGFVPGPIN
        ... .. .  ::.:::::.:.::. ::::.:.:::. :. .:.:..::: : .. .  .
gi|268 EYFKAKNIQ--FTLKYIDPSYIIRSSPANASDSLYCARLGSNAVHAAMAGKTKMLISLWS
                360       370       380       390       400        

             410       420       430       440    
MCA23. GNYAYIPLEEVAQTKNQVNTRDHKWAWVRSVTNQPDFETNVKG
        ....::.. ..  .:.::     :  : : :.::        
gi|268 TKFVHIPIKMAVIDRNKVNPNGSFWRDVLSSTGQPISMKN   
      410       420       430       440           

Library scan:  0:00:00  total CPU time:  0:00:00