Gene organization of MBG8 (80315 bp)
Chromosome V 20-22 Mb   FTP   Reference   Kazusa Status  
Gene organization of MBG8
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MBG8.1
+
1083..2272 4 0 hypothetical 22.1 kd protein in ccp1-sis2 intergenic region
MBG8.2
+
5637..6891 3 17 TH14 protein homolog
MBG8.3
+
20411..22335 4 0 chloroplast triose phosphate translocator precursor
MBG8.4
-
23811..25741 5 5 tryptophan synthase beta chain 1 precursor (EC 4.2.1.20)
MBG8.5
-
35617..37331 6 0 tem1 protein
MBG8.6
-
57674..60722 8 0 Human DEAD box RNA helicase-like protein
MBG8.7
-
67426..67761 1 5 protein translation factor sui1 homolog
MBG8.8
-
69864..71684 1 6 Arabidopsis pyruvate decarboxylase-2


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MBG8.P1
-
8737..9037 2 0 Caenorhabditis elegans cosmid C38H2
MBG8.P2
+
17371..17472 1 0 hypothetical protein 262
MBG8.P3
+
44212..45998 4 0 Synechocystis sp. PCC6803 slr0642 (integral membrane protein)
MBG8.P4
+
54788..56586 2 1 Drosophila melanogaster RNA-binding protein gene fragment
MBG8.P5
-
68942..69245 2 0 aconitate hydratase, cytoplasmic (EC 4.2.1.3)
MBG8.P6
+
77027..77155 1 0 Caenorhabditis elegans cosmid F55A11
MBG8.P7
+
78597..78671 1 0 Caenorhabditis elegans cosmid D2045


transcribed regions

identifier direction position Definition of the most similar sequence

MBG8.T1
+
3782..4167 clone 2A8T7P
clone TAY074; similar to GeneGOS2 protein
MBG8.T2
+
52693..52852 clone VBVQB12
MBG8.T3
+
53324..53520 clone 220O3T7
MBG8.T4
-
53808..54017 clone VBVQB12
MBG8.T5
+
54410..54670 clone TASG138, 5' end
MBG8.T6
-
68031..68398 clone 37B2T7


potential RNA genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MBG8.R1
-
46629..46700 1 0 tRNA-Met(CAU)


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. I. Sequence Features of the 1.6 Mb Regions Covered by Physically assigned Twenty P1 Clones. (1997) Shusei Sato, Hirokazu Kotani, Yasukazu Nakamura, Takakazu Kaneko, Erika Asamizu, Masanobu Fukami, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 4, 215-230
o Kazusa Status