Gene organization of MAH20 (80970 bp)
Chromosome V 2-4 Mb   FTP   Reference   Kazusa Status  
Gene organization of MAH20
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MAH20.1
+
3448..10143 16 1 peroxisome biosynthesis protein pas1
MAH20.2
-
12734..14638 1 0 Arabidopsis thaliana BAC clone T01B08 complete sequence
MAH20.3
+
15830..19384 12 1 Caenorhabditis elegans cosmid R166
MAH20.4
+
21048..22251 2 1 Arabidopsis thaliana BAC clone T01B08 complete sequence
MAH20.5
-
27374..29249 2 3 NADH dehydrogenase (EC 1.6.99.3)
MAH20.6
-
38630..41350 4 4 hypothetical 86.0 kd protein in glk1-ste50 intergenic region
MAH20.7
+
45956..47820 3 1 Soybean pyruvate kinase
MAH20.8
-
48502..50283 7 2 ER calcium-binding protein ERC-55 precursor
MAH20.9
+
51060..53389 9 3 serine/threonine-protein kinase ask2 (EC 2.7.1.-)
MAH20.10
+
53821..57072 10 0 hypothetical protein YML093w
MAH20.11
+
71532..72695 3 1 Arabidopsis thaliana flavonol synthase
MAH20.12
-
74059..80743 22 1 Synechocystis sp. PCC6803 slr0604 (LepA gene product)


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MAH20.P1
+
834..2871 5 0 anter-specific proline-rich protein apg
MAH20.P2
+
22638..22718 1 0 Arabidopsis thaliana calmodulin-binding protein
MAH20.P3
-
23257..23517 1 0 D13F protein
MAH20.P4
-
25082..25243 1 0 Id-associated protein 1
MAH20.P5
-
34138..35660 3 0 gc-rich sequence dna-binding factor
MAH20.P6
+
59096..61136 6 0 Human DEAD box RNA helicase-like protein
MAH20.P7
+
62399..64530 7 2 Human DEAD box RNA helicase-like protein


transcribed regions

identifier direction position Definition of the most similar sequence

MAH20.T1
-
1..174 clone 91P14T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. II. Sequence Features of the Regions of 1,044,062 bp Covered by Thirteen Physically assigned P1 Clones. (1997) Hirokazu Kotani, Yasukazu Nakamura, Shusei Sato, Takakazu Kaneko, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 4, 291-300
o Kazusa Status