Gene organization of MAC12 (74613 bp)
Chromosome V 4-6 Mb   FTP   Reference   Kazusa Status  
Gene organization of MAC12
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MAC12.1
-
1400..1882 1 0 zinc finger protein 2
MAC12.2
+
7375..9459 1 0 hypothetical protein
MAC12.3
-
9811..15516 29 0 A.thaliana 81kb genomic sequence
MAC12.4
-
34110..35380 2 7 chalcone synthase (EC 2.3.1.74)
MAC12.5
+
41057..41689 1 0 Arabidopsis thaliana BAC clone T01B08 complete sequence
MAC12.6
+
42266..42737 2 2 P.amygdalus mRNA for lipid transfer protein I
MAC12.7
+
47925..49050 4 0 Tropaeolum majus xyloglucan endotransglycosylase
MAC12.8
+
49824..50927 1 0 Human tumor susceptiblity protein
MAC12.9
+
53435..55334 6 0 Drosophila melanogaster fizzy
MAC12.10
-
55657..56778 3 0 cell division protein J
MAC12.11
-
59789..62447 9 0 BPF-1 protein


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MAC12.P1
-
5330..5965 2 0 L.esculentum partial mRNA product
MAC12.P2
-
18378..19163 3 0 G9a protein
MAC12.P3
+
29012..29167 1 0 cytosol aminopeptidase (EC 3.4.11.1)
MAC12.P4
-
51472..52035 3 1 Nascent polypeptide associated complex alpha chain
MAC12.P5
-
67722..67820 1 4 Caenorhabditis elegans cosmid F10D7
MAC12.P6
+
70931..71092 1 3 lipase 1 precursor (EC 3.1.1.3)
MAC12.P7
+
73339..74613 7 0 Arabidopsis thaliana AGL15


transcribed regions

identifier direction position Definition of the most similar sequence

MAC12.T1
-
17691..17856 clone VBVBE05; similar toHypothetical protein
MAC12.T2
+
27209..27632 clone 157D17T7
MAC12.T3
+
69926..70629 clone 129D19T7
clone 222C18T7
clone 121J17T7
MAC12.T4
-
71889..72203 clone FAFK26; 3' end


potential RNA genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

MAC12.R1
-
53022..53093 1 0 tRNA-Lys(UUU)


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. I. Sequence Features of the 1.6 Mb Regions Covered by Physically assigned Twenty P1 Clones. (1997) Shusei Sato, Hirokazu Kotani, Yasukazu Nakamura, Takakazu Kaneko, Erika Asamizu, Masanobu Fukami, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 4, 215-230
o Kazusa Status