SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K9L2.P1 (Universal genetic code) : 62 aa
 vs  library
 searching psu59232 library

    535 residues in     1 sequences
The best scores are:                              s-w
PSU59232, 535 bases, 2F0 checksum.                 (535) 214

>>PSU59232, 535 bases, 2F0 checksum.                 (535 aa)
Smith-Waterman score: 214;   47.761% identity in 67 aa overlap

PSU592 MMCRSLTLRFFLFIVLLQTCVRGGDVNDNLLSSCLNSHGVHNFTTLSTDTNSDYFKLLHA
               10        20        30        40        50        60

PSU592 SMQNPLFAKPTVSKPSFIVMPGSKEELSSTVHCCTRESWTIRLRSGGHSYEGLSYTADTP
               70        80        90       100       110       120

PSU592 FVIVDMMNLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGFTAGWCPTVGSGGHIS
              130       140       150       160       170       180

PSU592 GGGFGMMSRKYGLAADNVVDAILIDSNGAILDREKMGDDVFWAIRGGGGGVWGAIYAWKI
              190       200       210       220       230       240

PSU592 KLLPVPEKLTVFRVTKNVGIEDASSLLHKWQYVADELDEDFTVSVLGGVNGNDAWLMFLG
              250       260       270       280       290       300

PSU592 LHLGRKDAAKTIIDEKFPELGLVDKEFQEMSWGESMAFLSGLDTISELNNRFLKFDERAF
              310       320       330       340       350       360

PSU592 KTKVDFTKVSVPLNVFRHALEMLSEQPGGFIALNGFGGKMSEISTDFTPFPHRKGTKLMF
              370       380       390       400       410       420

                                                     10            
K9L2.P                                       AYVNYRDLDLG----RNTKDVK
                                              :::. :::.:    :: ... 
PSU592 EYIIAWNQDEESKIGEFSEWLAKFYDYLEPFVSKEPRVGYVNHIDLDIGGIDWRNKSSTT
              430       440       450       460       470       480

       20        30        40          50        60             
K9L2.P TCIKQAQVWGANYFKNNFNRLMMIKAK--VDPENFFRHEQSIPPMM           
       . .. :. ::  ::..:..::  .:::  .::.: : : :::::::           
PSU592 NAVEIARNWGERYFSSNYERL--VKAKTLIDPNNVFNHPQSIPPMMKFEEIYMLKEL
              490       500         510       520       530     

Library scan:  0:00:00  total CPU time:  0:00:00