SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K9L2.11 (Universal genetic code) : 432 aa
 vs  library
 searching ig005i109 library

    413 residues in     1 sequences
The best scores are:                              s-w
IG005I109, 413 bases, B4 checksum.                 (413) 724

>>IG005I109, 413 bases, B4 checksum.                 (413 aa)
Smith-Waterman score: 724;   33.182% identity in 440 aa overlap

                                                                   
K9L2.1                                                     MKLSNIPQ
                                                                 :.
IG005I MDSVIRFRNSIKINRSRAYYKSEESDITEGVVPSADGSAEAILVEGNLQNASPWWQQFPR
               10        20        30        40        50        60

       10        20        30        40          50        60      
K9L2.1 RYVIVFLTFLSTCVCYIERVGFSIAYTVAADAAGINQSSK--GTILSTFFVGYACSQVPG
       :.:::.: : :  .: ..::..:::  .   .   : ::   : : :.:: ::  .:. :
IG005I RWVIVLLCFSSFLLCNMDRVNMSIA--ILPMSQEYNWSSATVGLIQSSFFWGYLLTQILG
               70        80          90       100       110        

          70        80        90       100       110       120     
K9L2.1 G-WAAQKIGGRKVLLLSFVLWSSTCFLVPLDPNRVGLLVVARLLVGVAQGFIFPSIHTVL
       : :: .:.::.                                  :::.    :.....:
IG005I GIWA-DKFGGK----------------------------------GVAM----PAMNNML
      120                                          130             

         130       140       150       160        170       180    
K9L2.1 AQWVPPHERSRLVSITTSGMYLGAALGMWLLPALVELRG-PESVFLAEALAGVIWSLLWI
       ..:.:  :::: .... ::::::.. :. . : :.   : : ::: . .  : :: :::.
IG005I SKWIPVSERSRSLALVYSGMYLGSVTGLAFSPMLITKFGWP-SVFYSFGSLGSIWFLLWL
     140       150       160       170       180        190        

               190       200       210       220       230         
K9L2.1 RYA-----TDPPRSEHPKAAAAGFGGALLPTNVNHHKVTHIPWKKIMLSLP-VWAIVVNN
       ..:      ::  ::. : .   .::.  :    .. :: :::: ..:: : :::.....
IG005I KFAYSSPKDDPDLSEEEKKVI--LGGSK-P----REPVTVIPWK-LILSKPPVWALIISH
      200       210         220            230        240       250

      240       250       260       270        280        290      
K9L2.1 FTFHYALYVLMNWLPTYFELGLQISLQGMDSSKMVPYL-NMFVFSIVGGF-IADY-LITK
       :  ... ..:..:.:::..       :. .:....  : :.:  ...  : ...  :.  
IG005I FCHNWGTFILLTWMPTYYN-------QARSSASVISLLFNIFCEQVLK-FNLTESGLLC-
              260              270       280       290        300  

          300       310       320       330       340       350    
K9L2.1 RILS-VTRTRKFLNTVGFLIASAALMVLPMFRTENGVILCSSVALGFLALGRAGFAVNHM
        .:  .: .  : : .:  ::..  .:    :   :.    :.. :  :....:.  ::.
IG005I -VLPWLTMAV-FAN-IGGWIADT--LVS---R---GL----SITNGSDAFSQSGLYSNHQ
              310         320                   330       340      

          360       370       380       390       400       410    
K9L2.1 DIAPRYAGIVMGVSNTAGTLAGIIGVDLTGKLLEASKLVYSDLSHPESWRVVFFIPGLLC
       ::.:::::...:.:::::.:::..:.  :: .:. .           ::  :: .   : 
IG005I DIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQRG-----------SWDDVFKVAVALY
        350       360       370       380                  390     

          420       430  
K9L2.1 IFSSVVFLLFSTGERIFD
       .....:. ::.:::.:.:
IG005I LIGTLVWNLFATGEKILD
         400       410   

Library scan:  0:00:00  total CPU time:  0:00:01