SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K9I9.10 (Universal genetic code) : 154 aa
 vs  library
 searching af020351 library

    175 residues in     1 sequences
The best scores are:                              s-w
AF020351, 175 bases, 1DD2 checksum.                (175) 401

>>AF020351, 175 bases, 1DD2 checksum.                (175 aa)
Smith-Waterman score: 401;   41.611% identity in 149 aa overlap

                                       10        20         30     
K9I9.1                       MALCATT--QRTIRIAATLRRVARPFATDA-VVESDYK
                              :: ..    :..: ..: : .:.  . :. ..  : :
AF0203 MAAVSMSVVLRQTLWRRRAVAVAALSVSRVPTRSLR-TSTWR-LAQDQTQDTQLITVDEK
               10        20        30         40         50        

          40        50         60        70        80        90    
K9I9.1 RGEIGKVSGIPEEHL-SRKVIIYSPARTATQSGSGKLGKWKINFVSTLKWENPLMGWTST
         .:  ..:.::::. .::: :. :::.  ::: ..  :::..: .  .::::::::.::
AF0203 L-DITTLTGVPEEHIKTRKVRIFVPARNNMQSGVNNTKKWKMEFDTRERWENPLMGWAST
        60        70        80        90       100       110       

          100       110       120       130       140       150    
K9I9.1 GDPYANVGDSALAFDSEEAAKSFAERHGWDYKVKKPNTPLLKVKSYSDNFKWKGNPQPEN
       .:: .:.   .:.:...: : ::::..::.: ... ..:  : :::. ::.:.       
AF0203 ADPLSNM---VLTFSTKEDAVSFAEKNGWSYDIEERKVPKPKSKSYGANFSWNKRTRVST
       120          130       140       150       160       170    

AF0203 K
        

Library scan:  0:00:00  total CPU time:  0:00:00