SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K9D7.P3 (Universal genetic code) : 56 aa
 vs  library
 searching gi:2462828 library

   1152 residues in     1 sequences
The best scores are:                              s-w
gi|2462828                                         (1152) 143

>>gi|2462828                                         (1152 aa)
Smith-Waterman score: 143;   33.333% identity in 57 aa overlap

gi|246 MFDRRRTGGRDGTTRLRGELMAAPPSSLGSIEIDTLEVLINSKLWFLSSRSFFSISTTNN
               10        20        30        40        50        60

gi|246 NNNLSRFLFRFSTLPHCAASSSSSSSNLESYYANLILSSHGDSNKPNRKWSSHQFRLLLT
               70        80        90       100       110       120

gi|246 DPNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAE
              130       140       150       160       170       180

gi|246 RSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSV
              190       200       210       220       230       240

gi|246 RNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLE
              250       260       270       280       290       300

gi|246 MKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGL
              310       320       330       340       350       360

gi|246 FDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHG
              370       380       390       400       410       420

gi|246 YIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD
              430       440       450       460       470       480

gi|246 VITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHE
              490       500       510       520       530       540

gi|246 EMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEN
              550       560       570       580       590       600

gi|246 GQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTH
              610       620       630       640       650       660

gi|246 NALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD
              670       680       690       700       710       720

gi|246 KEIEPDGYTHRALFKHLEKDHESMALDSSGKQPEQQQQQQPRASSGNGEARLKLRRTPNE
              730       740       750       760       770       780

gi|246 EHEPENYEDLPLDYSPSLFTSLERYLPEQLLNSTRIDKASFMRDLLLRYSPDTERVRVLR
              790       800       810       820       830       840

gi|246 HKEYRDKIMSSYQRLHGEIYTLDPSSFFAPSFLGAFSRKSEPNFRSSMVESYPGIFTFEM
              850       860       870       880       890       900

gi|246 FKPQFCEMLLAEVEHMEKWVYDSRSTIMRPNTMNNFGVVLDDFGFDSMLQKLVDDFISPI
              910       920       930       940       950       960

gi|246 AQDFLVIVASLLFADGLGSNLVSVLFPEVCGTSLDSHHGYIVEYGKDRDVDLGFHVDDSE
              970       980       990      1000      1010      1020

gi|246 VSLNVCLGKQFSGGELYFRGVRCDKHVNSDSTEKEVYDYSHVPGHAILHRGRHRHGARAT
             1030      1040      1050      1060      1070      1080

                            10        20        30        40       
K9D7.P              SSLFREMQTYDNEFRDWCGQCAREKKEKKSQSLASKRKVKKRK---K
                    :: ::::..:. .:  ::: :  .:.... .:. . ...  ::   :
gi|246 TSGHRANLILWCRSSTFREMKNYQRDFSGWCGGCKLDKQRRQRDSINATKEILARKAAEK
             1090      1100      1110      1120      1130      1140

           50      
K9D7.P DMILLKFIRCFV
        .. :    :  
gi|246 TLVELASKSCAE
             1150  

Library scan:  0:00:00  total CPU time:  0:00:00