SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K3K3.P1 (Universal genetic code) : 214 aa
 vs  library
 searching boy123211 library

   1131 residues in     1 sequences
The best scores are:                              s-w
BOY123211, 1131 bases, 1228 checksum.              (1131) 419

>>BOY123211, 1131 bases, 1228 checksum.              (1131 aa)
Smith-Waterman score: 419;   33.175% identity in 211 aa overlap

               10        20        30          40        50        
K3K3.P MSTELALTTSSSTTTQPRRTISPYDLTSGDNPGT-LIS-KPLLRGPNYDEWATNLRLALK
                    . .: .  ::  . ..:.::  ::: :  : : :::.: . ...:: 
BOY123        MVIPPESMDPNQ--SPLFMHNADHPGLQLISLK--LDGSNYDDWNAAMKIALD
                      10          20        30          40         

       60        70        80        90        100       110       
K3K3.P ARKKFGFADGTIPQPDETNPDFDDWIANNALVVSWMKL-TIHESLATSMSHLDDSHDMWT
       :..:.::.:::. .:: ..: :  :   :..: ::. : ..  ..  :. .:.:. :.: 
BOY123 AKNKIGFVDGTLTRPDTSDPTFRLWSRCNSMVKSWL-LNSVSPQIYRSILRLNDAADIWR
      50        60        70        80         90       100        

       120       130       140        150       160       170      
K3K3.P HIQKRFGVKNGQRIQRLKTELATCRQKGT-PIETYYGKLSQLWRSLADYQQAKT------
        .. :: . :  :   :  :.   .: :.  .  ::  :. :: .: . ..  :      
BOY123 DLHGRFHMTNLPRTFNLTQEIQDLKQ-GSMSLSDYYTTLKTLWDNLESVDEPDTPCVCGN
      110       120       130        140       150       160       

              180       190        200       210                   
K3K3.P MEEVRKEREEDKLHQFLMGLDESMYGAVK-SALLSRVPLPSLEEA               
        :...:. .. :. .:: ::..: :. .. . ....: :::: :.               
BOY123 AEKLQKKVDRAKIVKFLAGLNDS-YAIIRRQIIMKKV-LPSLVEVYNILDQDDSQKGFST
       170       180       190        200        210       220     

BOY123 AITPAAFNVSENVPPPMAEAGICYVQTGPNKGRPICSFCNRVGHIAERCYKKHGFPPGFV
         230       240       250       260       270       280     

BOY123 SKYKSQSSGDRLQKPKQVAAQVSFSPPNSGQSPMTMDHLVGNHSKEQLQQFIALFSSQLP
         290       300       310       320       330       340     

BOY123 NVTMGSNEASSSKQPMDNSGISFNPTTLVFIGLLTVSRHTLANETWIIDSGATHHVCHDR
         350       360       370       380       390       400     

BOY123 SMYTSIDITTTSNVNLPNGMIVKISGVGIVQLNEHITLHNVLYIPEFRLNLLSISSLTSD
         410       420       430       440       450       460     

BOY123 IGSQVIFDVSSCAIQDPTKGWTIGQGRRVANLYVLDVKSSPMKINAVVDISLWHKRLGHP
         470       480       490       500       510       520     

BOY123 SYTRLDKISEALGTTKHKNKGDAHCHVCHLAKQKKLSYSSQNHICTASFQLLHVDVWGPF
         530       540       550       560       570       580     

BOY123 SVETLEGYKYFLTIVDDHSRATWIYLLQSKSDVLHIFPTFVNQIETQYNTKIKSVRRDNA
         590       600       610       620       630       640     

BOY123 PELSFTELFKEKGIVSYHSCPETLEQNSVLERKHQHLLNVARALMFQSQVPLQYWGDCVL
         650       660       670       680       690       700     

BOY123 TAAFLINRTPSPLLANKSPYEVLMGKAPQYDQLRTFGCLCYGSTSPKQRHKFMPRSRACV
         710       720       730       740       750       760     

BOY123 FLGYPSGYKGYKLLDLESNKIYISRNVTFHEDIFPMAKHQKMDESSLHFFPPKVTVPSAP
         770       780       790       800       810       820     

BOY123 SPNISSSPFSTLSPQISKRQRTVPAHLKDFHCYSVHDSAYPISSTLSYSQISSHHLAYIN
         830       840       850       860       870       880     

BOY123 SITNIPIPQSYAEVRQSKEWTESADKELDAMEENDTWDVVPLPKGKKAIGCRWVHTLKFN
         890       900       910       920       930       940     

BOY123 ADGTLERRKSRLVGKGYTQKEGLDYIETFSPVAKMATVKLLLKVGASKKWFLHQLDISNA
         950       960       970       980       990      1000     

BOY123 FLNGELDEEIYMKLPEGYAERKGDLPPNAVCKLKKSIYGLKQASRQWFKKFSTSLFQLGF
        1010      1020      1030      1040      1050      1060     

BOY123 QKAHGDHTLFVRQTENDFVAVLVYVDDIVIASTDDAVAVKLKSDLKSFFKLRDLGSLKYF
        1070      1080      1090      1100      1110      1120     

BOY123 FGFGNL
        1130 

Library scan:  0:00:00  total CPU time:  0:00:00