SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K3K3.9 (Universal genetic code) : 320 aa
 vs  library
 searching s53082 library

    258 residues in     1 sequences
The best scores are:                              s-w
S53082, 258 bases, 6F8 checksum.                   (258)1018

>>S53082, 258 bases, 6F8 checksum.                   (258 aa)
Smith-Waterman score: 1018;   57.200% identity in 250 aa overlap

               10        20        30          40        50        
K3K3.9 MVIWVVPMSYGHGAMIGNAVEAPDVAEAPGI--NDPSKALDTNWYDARATFYG--DIHGG
                            :: .:. ::.  . :       : .:.:::::  :  : 
S53082      MAAILLLTIASLTSLFAPTTARIPGVYTGGP-------WTSAHATFYGGSDASG-
                    10        20        30               40        

         60        70        80        90       100         110    
K3K3.9 DTQQGACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPG--SVKIT
        :. ::::::::. ::::. ::::::::::.: .::::.:. : .::.:: ::  :. ::
S53082 -TMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFELKCDQDPRWCNPGNPSILIT
         50        60        70        80        90       100      

          120         130       140       150       160       170  
K3K3.9 ATNFCPANYSKTTDL--WCNPPQKHFDLSLAMFLKIAKYKAGVVPVRYRRIPCSKTGGVK
       :::::: :... .:   :::::. ::::.. ::::::.:.::.::: :::.:: :.::..
S53082 ATNFCPPNFAEPSDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVAYRRVPCRKAGGIR
        110       120       130       140       150       160      

            180       190       200       210       220       230  
K3K3.9 FETKGNPYFLMVLIYNVGGAGDIKYVQVKGNKTGWITMKKNWGQNWTTITVLTGQGLSFR
       :  .:  :: .::: ::.:::::  :.:::..:.:.::..:::::: . .:..::.::::
S53082 FTINGFRYFNLVLITNVAGAGDIVRVSVKGTNTAWMTMSRNWGQNWQSNAVFVGQALSFR
        170       180       190       200       210       220      

            240       250       260       270       280       290  
K3K3.9 VTTSDGITKDFWNVMPKNWGFGQTFDASKVNHSSDVDGKGGGGGDGNDGGDDDNGSDGTN
       :: ::  :.  ::: : .: ::::: ..: :                             
S53082 VTGSDRRTSTSWNVAPPHWQFGQTF-TGK-NFRV                          
        230       240       250                                    

            300       310       320
K3K3.9 GEVDGSGCGDTVVAVINDDGELMVDVMV

Library scan:  0:00:00  total CPU time:  0:00:00