SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K2A18.15 (Universal genetic code) : 360 aa
 vs  library
 searching fenr_vicfa library

    363 residues in     1 sequences
The best scores are:                              s-w
FENR_VICFA, 363 bases, 1A52 checksum.              (363)2069

>>FENR_VICFA, 363 bases, 1A52 checksum.              (363 aa)
Smith-Waterman score: 2069;   83.516% identity in 364 aa overlap

               10        20        30           40         50      
K2A18. MAAAISAAVSLPSSKSSSLLTKISSVSPQRIFLKK-S--TVCYR-RVVSVKAQVTTDTTE
       ::::..:::::: :.:.::  . : :.:.:. .:: :  .:    :: ...::.::.. :
FENR_V MAAAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSLNSVSISGRVGTIRAQITTEA-E
               10        20        30        40        50          

         60        70        80        90       100       110      
K2A18. APPVKVVKESKKQEEGIVVNKFKPKNPYTGRCLLNTKITGDDAPGETWHIVFTTEGEVPY
       :: .::::.::::.:::::::::::.::.::::::::::::::::::::.::::::::::
FENR_V APVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFTTEGEVPY
      60        70        80        90       100       110         

        120       130       140       150       160       170      
K2A18. REGQSIGVIPEGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDGGEIVKG
       :::::::..:.::::::::::::::::::::::::::::::::::::::::::.::.:::
FENR_V REGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKG
     120       130       140       150       160       170         

        180       190       200       210       220       230      
K2A18. VCSNFLCDLKPGDEAKITGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEEHE
       ::::::::::::.:.:::::::::::::::::::.::::::::::::::::::::::.::
FENR_V VCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHE
     180       190       200       210       220       230         

        240       250       260       270       280       290      
K2A18. DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKNPDNFRLDFAVSREQTNEKGEKMYIQTR
       :::::::::::::::::::::::::::::::: :.::::::::::::.:.::::::::::
FENR_V DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTR
     240       250       260       270       280       290         

        300       310       320       330       340       350      
K2A18. MAEYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWLEYKKQLKRSEQWN
       ::.::::::::::::::::::::::::::::::::::.  ::::::.:::. ::..::::
FENR_V MAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSIRPKDGIDWIEYKRTLKKAEQWN
     300       310       320       330       340       350         

        360
K2A18. VEVY
       ::::
FENR_V VEVY
     360   

Library scan:  0:00:00  total CPU time:  0:00:00