SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K2A18.10 (Universal genetic code) : 340 aa
 vs  library
 searching p2c2_schpo library

    370 residues in     1 sequences
The best scores are:                              s-w
P2C2_SCHPO, 370 bases, 14 checksum.                (370) 434

>>P2C2_SCHPO, 370 bases, 14 checksum.                (370 aa)
Smith-Waterman score: 434;   30.982% identity in 326 aa overlap

               10        20        30        40        50          
K2A18. MLSLFFNFLTSCLWPSSSTTSHTYSDSKGKQDGLLWYKDSAHHLFGDFSMAVVQANNL-L
                         : :.   :..... :  :     :  ::  :   .:.  . .
P2C2_S                MGQTLSEPVLDKHSSSGGDRWL----H--FG-VSH--MQGWRISM
                              10        20                 30      

      60        70        80        90       100       110         
K2A18. EDQSQVESGPLTTLSSSGPYGTFVGVYDGHGGPETSRFVNDHLFHHLKRFAAEQDSMSVD
       :: ..     .:  .::.:  .: ::.::::: .....  .::   .:     : :.   
P2C2_S ED-AHCALLNFTDSNSSNPPTSFFGVFDGHGGDRVAKYCRQHLPDIIKS----QPSF---
          40        50        60        70        80               

     120        130       140        150         160        170    
K2A18. VIRKAY-EATEEGFLGVVAKQWAVKPH-IAAVGSCCLI--GVVCDGK-LYVANVGDSRAV
         .  : :: . :::  .: .  .. . .    : :    ... : . .: ::.::::.:
P2C2_S -WKGNYDEALKSGFL--AADNALMQDRDMQEDPSGCTATTALIVDHQVIYCANAGDSRTV
        90       100         110       120       130       140     

          180       190         200       210       220       230  
K2A18. LGKVIKATGEVNALQLSAEH--NVSIESVRQEMHSLHPDDSHIVVLKHNVWRVKGIIQVS
       ::.  :.:.:     :: .:  : ..:..:     .    . :     .  ::.: . .:
P2C2_S LGR--KGTAE----PLSFDHKPNNDVEKAR-----ITAAGGFI-----DFGRVNGSLALS
           150           160            170            180         

            240       250       260       270       280       290  
K2A18. RSIGDVYLKKSEFNKEPLYTKYRLREPMKRPILSWEPSITVHDLQPDDQFLIFASDGLWE
       :.:::   ::.  .. :         : :. :..  :....:...:::.:::.: ::.:.
P2C2_S RAIGDFEYKKD--SSLP---------PEKQ-IVTAFPDVVIHNIDPDDEFLILACDGIWD
     190       200                   210       220       230       

            300         310              320       330       340   
K2A18. QLSNQEAVEIVQNH--PRNSK---CEN-AD---AGDSEETGESCAAGGSKEKRDEIF   
         :.:..::.:.     :.:    :::  :   :..::  : .:                
P2C2_S CKSSQQVVEFVRRGIVARQSLEVICENLMDRCIASNSESCGIGCDNMTICIVAFLHGRGL
       240       250       260       270       280       290       

P2C2_S EDWYNWITQRVNSGEGPCAPPSYAELRGPNTIADARNLQLEYDHIASHEYGSGDTYDSDS
       300       310       320       330       340       350       

P2C2_S DDETIAYDRYYLH
       360       370

Library scan:  0:00:00  total CPU time:  0:00:00