Gene organization of K2A18 (79899 bp)
Chromosome V 24-26 Mb   FTP   Reference   Kazusa Status  
Gene organization of K2A18
figure legend

potential protein genes

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

K2A18.1
-
3992..6887 13 0 DNA sequence of BAC F5J6 from chromosome IV
K2A18.2
+
8924..10501 6 0 hypothetical 47.5 kD protein in ape3-apm3 intergenic region
K2A18.3
+
11435..12798 2 1 hypothetical 80.0 kD protein in pol1-ras2 intergenic region
K2A18.4
+
16487..17230 1 2 heterogeneous nuclear ribonucleoprotein F
K2A18.5
-
17676..21171 17 1 putative transmembrane protein G5p
K2A18.6
+
27037..27616 4 10 ketoconazole resistance protein
K2A18.7
-
34083..35714 6 1 ankyrin repeat protein
K2A18.8
+
35961..37407 6 0 BAC TM017A05
K2A18.9
+
38403..39510 5 0 BAC TM017A05
K2A18.10
-
40220..41511 4 0 protein phosphatase 2c homolog 2 (EC 3.1.3.16)
K2A18.11
-
47999..50129 8 3 3-dehydroquinate synthase (EC 4.6.1.3)
K2A18.12
+
50716..53568 10 0 checkpoint protein rad17
K2A18.13
-
53928..55157 3 10 proteasome, alpha subunit (EC 3.4.99.46)
K2A18.14
-
55496..60914 22 0 81kb genomic sequence
K2A18.15
-
67686..69492 9 11 ferredoxin-NADP reductase precursor (EC 1.18.1.2)
K2A18.16
-
70131..72083 1 2 81kb genomic sequence
K2A18.17
-
73164..75914 11 0 CDPK-related protein kinase
K2A18.18
+
77657..78651 4 0 chalcone--flavanone isomerase (EC 5.5.1.6)


potential exons

identifier direction position No. of
exon
No. of
EST
Definition of the most similar sequence

K2A18.P1
+
62596..63160 2 0 RING zinc finger


transcribed regions

identifier direction position Definition of the most similar sequence

K2A18.T1
+
685..1610 Lambda-PRL2 cDNA clone 312F2T7
Lambda-PRL2 cDNA clone 228C21T7
Lambda-PRL2 cDNA clone 142K5XP 3'
Lambda-PRL2 cDNA clone 230E7T7
Lambda-PRL2 cDNA clone 142K5T7
K2A18.T2
+
3234..3653 Lambda-PRL2 cDNA clone 124J16T7
Lambda-PRL2 cDNA clone 124I15T7
Lambda-PRL2 cDNA clone 124J15T7
K2A18.T3
+
11155..11177 Lambda-PRL2 cDNA clone 178J4T7
K2A18.T4
-
21368..21813 Lambda-PRL2 cDNA clone 151N17T7
K2A18.T5
+
28593..28863 Lambda-PRL1 cDNA clone G6C9T7
K2A18.T6
+
32611..33392 Lambda-PRL2 cDNA clone 248L12T7
Lambda-PRL2 cDNA clone 220O12T7
Lambda-PRL2 cDNA clone 205I13T7
Lambda-PRL2 cDNA clone 142H19T7
Lambda-PRL2 cDNA clone 170N20T7
Lambda-PRL2 cDNA clone 211A2T7
Lambda-PRL2 cDNA clone 171P15T7
Lambda-PRL2 cDNA clone 188D16T7
Lambda-PRL2 cDNA clone 221B14T7
Lambda-PRL2 cDNA clone 158C14T7
Lambda-PRL2 cDNA clone 140O17T7
Lambda-PRL2 cDNA clone 97N22T7
Lambda-PRL2 cDNA clone 129A1T7
K2A18.T7
+
42235..42478 Lambda-PRL2 cDNA clone 157K8T7
K2A18.T8
+
43233..43648 clone YAP006T7, 3' end
K2A18.T9
+
61929..62472 clone VBVDC10; Similar to C5apeptidase precursor ; Streptococcus pyogenes
Lambda-PRL2 cDNA clone 222M6T7
K2A18.T10
-
63342..63675 clone VBVDC10
K2A18.T11
+
64231..64727 Lambda-PRL2 cDNA clone 135E6T7
Lambda-PRL2 cDNA clone 127J18T7
Lambda-PRL2 cDNA clone 149L5T7
K2A18.T12
+
65431..66139 clone YAPS35; 5' end
K2A18.T13
+
67237..67632 clone YAPS35; 3' end
K2A18.T14
+
79085..79594 Lambda-PRL2 cDNA clone 120J22T7
Lambda-PRL2 cDNA clone 85D1T7


Reference
Structural Analysis of Arabidopsis thaliana Chromosome 5. V. Sequence Features of the Regions of 1,381,565 bp Covered by 21 Physically assigned P1 and TAC Clones (1998) Takakazu Kaneko, Hirokazu Kotani, Yasukazu Nakamura, Shusei Sato, Erika Asamizu, Nobuyuki Miyajima, and Satoshi Tabata DNA Research, 5, 131-145
o Kazusa Status