SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K24G6.9 (Universal genetic code) : 408 aa
 vs  library
 searching atu9321513 library

    415 residues in     1 sequences
The best scores are:                              s-w
ATU9321513, 415 bases, 1820 checksum.              (415) 823

>>ATU9321513, 415 bases, 1820 checksum.              (415 aa)
Smith-Waterman score: 823;   36.725% identity in 403 aa overlap

               10        20        30        40        50          
K24G6. MSRQVKSSGDGGDWWIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYAE---RELT
                   .:: :.: .: .:... :...:: :::.: :.......:.:   :.:.
ATU932     MFPCRTPPNWWTEELCILDVDFFSDVVSSMKQRGVKPSSLASAIITYTEKSLRDLV
                   10        20        30        40        50      

                60                  70        80        90         
K24G6. K----R----SE---HE-----QT--IVETIVTLLPVENLVVPISFLFGLLRRAVILDTS
       .    :    :.   .:     :   .:..::.::: .. . :..:: .::: ::.::::
ATU932 RDHSGRGVKYSDPGDNESDERSQQRDLVQSIVSLLPSDKGLFPVNFLCSLLRCAVFLDTS
         60        70        80        90       100       110      

     100       110       120       130       140       150         
K24G6. VSCRLDLERRLGSQLDMATLDDLLIPSFRHAGDTLFDIDTVHRILVNFSQQGGDDSEDEE
       ..:. .::.:..  :. ...:::::::: . :. :.:.:.:.::.  : ..     : . 
ATU932 LTCKNELEKRISVVLEHVSVDDLLIPSFTYDGERLLDLDSVRRIISAFVEK-----EKNV
        120       130       140       150       160            170 

     160        170       180       190       200       210        
K24G6. SVFEC-DSPHSPSQTAMFKVAKLVDSYLAEIAPDANLDLSKFLLIAEALPPHARTLHDGL
       .::.  :  ..  .... .::: :::::::::  ..: .:::  ::. .:  ::   : :
ATU932 GVFNGGDFNRGVCSVSLQRVAKTVDSYLAEIATYGDLTISKFNAIANLVPKSARKSDDDL
             180       190       200       210       220       230 

      220       230       240       250       260       270        
K24G6. YRAIDLYLKAHQGLSDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLYFEQLK
       :::::..:::: .:.. ...:. . .:  ::: .:  ::.::.:::.. ....::..:::
ATU932 YRAIDIFLKAHPNLDEIEREKVCSSMDPLKLSYDARLHASQNKRLPVNIVLHALYYDQLK
             240       250       260       270       280       290 

      280       290       300       310       320       330        
K24G6. LRSSLCSSYSDEEPKPKQQQQQSWRINSGALSATMSPKDNYASLRRENRELKLELARLRM
       :::..    ...: .      .. .  :  :.:     :.  .: .::. :. :: ...:
ATU932 LRSGV----AEQEERAVVVLPEALKTRS-QLQA-----DT--TLAKENEALRSELMKMKM
                 300       310             320         330         

      340         350         360           370       380       390
K24G6. RLNDLEKEH--ICMKRDMQRS--HSRK----FMSSFSKKMGKLSFFGHSSSRGSSSPSKQ
        ..:..:..     . . . :   :.:    :.:: :::.:::. : ...:. .:     
ATU932 YVSDMQKNKNGAGASSSNSSSLVSSKKSKHTFFSSVSKKLGKLNPF-KNGSKDTSHIDED
     340       350       360       370       380        390        

              400        
K24G6. SFRTDSKVLMERTCASTD
                         
ATU932 LGGVDITKPRRRRFSIS 
      400       410      

Library scan:  0:00:00  total CPU time:  0:00:01