SSEARCH searches a sequence database
 using the Smith-Waterman algorithm
 version 2.0u54, July. 1996
Please cite:
 T. F. Smith and M. S. Waterman, (1981) J. Mol. Biol. 147:195-197; 
 W.R. Pearson (1991) Genomics 11:635-650

 >K24G6.15 (Universal genetic code) : 173 aa
 vs  library
 searching s55884 library

    259 residues in     1 sequences
The best scores are:                              s-w
S55884, 259 bases, D6C checksum.                   (259) 246

>>S55884, 259 bases, D6C checksum.                   (259 aa)
Smith-Waterman score: 246;   31.902% identity in 163 aa overlap

                                                                   
K24G6.                                                     MEDHYHQV
                                                                   
S55884 MRPILDLEIEASSGSSSSQVASNLSPVGEDYKPISLNLSLSFNNNNNNNLDLESSSLTLP
               10        20        30        40        50        60

       10        20        30        40        50        60        
K24G6. EVEGEEEIKPSKEANKTDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARRAK
            :  .:  : .. .. . : :.: : .:.:::.:::::::::::::.::: :   :
S55884 LSSTSESSNP--EQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLA---K
               70          80        90       100       110        

       70        80         90       100        110           120  
K24G6. RAYDFVNNNDFLHTLPVFL-SSPSQHHLTILGY-PASASVACFPTVHP----DHPIFKSS
       ::.           : :.: ::: . ...:.   : .  ..:.: .:     .   :.. 
S55884 RAM-----------LWVLLGSSPVEDQVAIMRLLPQQP-LSCLP-LHGSGNGNMTSFRTL
                    120       130       140         150       160  

              130       140       150       160        170         
K24G6. G--SHVVLATSHQGRDCKGGYCCQQRVDILDHHYNVVNSDKGK-DQCLDLSLHL      
       :  .:   ...:   : .     .:  . : .  :..  ..:   .:.            
S55884 GIRAH---SSAH---DVS---MTRQTPETLIR--NIARFNQGYFGNCIPFYVEDDEAEML
               170             180         190       200       210 

S55884 WPGSFRQATNAVAVEAGNDNLGERKMDFLDVKQAMDMESSLPDLTLKL
             220       230       240       250         

Library scan:  0:00:00  total CPU time:  0:00:00